Nicotiana attenuata (coyote tobacco): 109239062
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Entry
109239062 CDS
T05870
Name
(RefSeq) nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109239062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109239062
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109239062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoprot-TPR
TPR_MLP1_2
TPR
Leu_zip
Motif
Other DBs
NCBI-GeneID:
109239062
NCBI-ProteinID:
XP_019261114
UniProt:
A0A314LAS4
LinkDB
All DBs
Position
Unknown
AA seq
2059 aa
AA seq
DB search
MPLFMSDEEYERCSNDAVLVSEKADEFIRDLYNQLETVKAQADAASVTAEQSCSFLEQKY
LSLNSEYSELQSQYSELNSSFERRLSELSQVQAEKQQVHIQSIGKDGDVDRLSTEASELR
KTKRQLMELVEQKDLEISEKNSTIKSYLDKILHLTETGAAREARVCDLETEVSRSQASCS
RLLQEKELVERHNAWLNDELTAKVNDLMKLRKVHSELEADMSAKLADVEKKFNECDRCLK
RKEEQVRELELKFTSLEHDLLTSKDVAAAKEEQMSGEIATLNKLVELYKESSEEWSKKAG
ELEGVIKALESHGNQIENDYKERLEKEVSAKKELEEEVACLKNKLVKSEAELKIRGEDTL
KLLPLNYFTTESLPNSVETSDMVEDDHMVVPSLPIGVSGTALAASLLREGWGLAKMYTKY
QEAVDALRHEQLGRKQAQAVLERVLCEIEEKAGVILDERAEHERLEDAYSVLSEKMQHSL
SQQADLERNVLELKADLRSRDRDYAVAQAEIVDLQEQVTVLLKECRDIQLRGGSVGPKND
DSVVSDSVFMFGAESNADNAGRLLSYKDINSLVEQNVQLRGLVRSLSDQIENRELELKEK
YEKELQKHIDEASSKVNAVLERADEQGRMIESLHTAVAMYKRLYEEHRVHSSDTQSQKLA
EVERQEVMLLPDTSHEALGRAQERAFERVKCLEEESSRLRSELISLRSEREKSALEAQFA
RDKLDRYVKDFELQREEHNAVLMRNVEFSQLIVDHQKKLRESYESLNAAEELSRKLKMEV
SILKNEKDMLINAEKRASDEVYNLSQRVHSLQAHLDTLQSTENVRDEARAAERKRQEEYI
KCIEKEWAEAKKELQEERDKVRNLMLERESDFKNALRRAEEMGKELASTSRSLAAAESRA
VIAEARSTDLEEKLKASQGKMSERADEGGPSSATELSGDMHSAEEVKTLKEEMQANKNHM
LQYKSIAQANEEALKQLELAYEDLKVEADRVKKSMEEEALSLRKHITDLENECTVKSIEA
ASATAGKEEAVAATLAEISSLKEDNSAKMSQISNLESQITALKDDLDKEHQRWRAAQVNY
ERQVILQSETIQELTRTSQALAALQEESSELRKISDILKTENNELKAKWGAEMSALEVSK
TEAEKKYTEANEQNKILLDRLEGLHIKLAEKDRESLGTSSGSTTAESDDGLMNVVNYLRR
SKDIAETEISLLRQEKLRLQSQLENAQRRADIAEASLNSERENSRAQVLNEEEFKALQLQ
VRELNLLRESNLQLREENKHNFEECQKLREAAQKMKIEVEGLQKLLNERQENVEACRKEI
EMQRLDKEQLERRVNELVERCKSFDLEEYASLKEAAQQMQVNLREKDAELEKIKKVISEQ
QNLVSSLEQDLTRSRTELSQRELRINEVLQAEASLKSEVDKLRRLIAQLKKRAENLSKEK
DNLSKEKDNLSKEKDNISKEKDDLARENQALSKQLEDAKLGKRTADAADEQALKDKEKEK
DTRIQGLEKMAFQLREELKQGKLKRFKTQKTISDSYETVTQQRSKLLDELDKHKQALKTL
TDEVEKVKQAKSSQTEGTSVDQLLSGTHLEDFTAAYFQAVDDFERVARGELGVTGATDIS
APDASVSGSVVPGPAAAPSPPASLLTSTPVVGKVVLSKMTSETRKTGRRLVRPRITKPEE
PSADVEMQDTDVSSSSGKHITTPQNAENLDNATLATQPPIRKRPSAASTSELQEESSATG
EPCLDVAQPVLKKSKGLEAPQEGGEEKSVGNVEISESLPTTEEHDAGDETQGFKEEASDT
EKDETMLSGEQVEEPAVIATNQAESQVDRTDGADDTLGRPSEVSTPDNESKFQVEQEREQ
LAADEREEGELIADPEDVGNLEGGSNLLMGSPENLEPQAESLAGTDEDALLTPTDTGEIE
SSQLPDDDKNDEVDTTEELSESSDKLNDGGDQVATETDQAVDAVVTGEKPSSSSVDSSIS
KEGGAGDTAAAETEEGKQVSPVNRSSRTINLNERARERASLRQAGMLSSTMPRGRGRAPR
GRGGRNVRGGRGQTPGSQG
NT seq
6180 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgtttatgtcggatgaggaatacgagcggtgctcgaacgacgccgtgttggta
tctgaaaaagctgatgaattcatacgcgatttatacaatcaactggagactgtgaaagcg
caggctgatgctgcatccgttactgccgaacagagttgttccttcctcgaacagaagtac
ctctcgcttaattcagagtactctgagcttcaatcgcagtactctgagcttaactcgtcg
tttgagagacgcctctctgaactctctcaagtacaagccgagaagcagcaagttcacatc
caatctattggaaaggatggagatgtggaccggttatccacagaggcttcagaactgcgg
aaaacaaagaggcagttgatggaattggtggagcagaaagacttggagatcagtgagaaa
aattccactatcaaaagctatcttgataagatacttcacttgactgaaactggtgcggct
agggaagcgcgggtctgtgacttggagactgaagtatcacgctctcaggcttcttgttcg
cggcttttgcaggagaaggagcttgttgagaggcataatgcatggctgaatgatgagtta
acagccaaggtcaatgatctcatgaagctgcgtaaagtgcattctgagcttgaggcggat
atgtctgccaaacttgctgatgtggagaaaaaatttaatgaatgtgataggtgtttgaag
aggaaagaggaacaggtgagggaattggagttaaagttcacttctctagagcacgattta
ttaacttccaaggatgtagcagctgcgaaagaggagcaaatgtctggggagattgcaacc
ttgaacaagcttgtggaattgtacaaggagagttctgaggagtggtctaaaaaggcagga
gaacttgaaggagtaattaaggctttagagagtcatggaaaccaaatagagaatgactat
aaagagaggcttgaaaaagaagtatctgcaaagaaagaactagaggaggaggttgcatgc
ttgaaaaataagcttgtgaaaagtgaagcagaattgaaaattaggggagaagatacactg
aaacttcttcctttgaattattttacaacggaatcattgccaaactcagttgaaactagt
gacatggttgaggatgatcacatggttgtacctagtctacctattggtgtttcaggaacc
gcattagcagcttcacttcttcgggagggttggggtctggctaagatgtacacaaaatat
caggaagctgttgatgctctacgacatgaacaattgggaagaaaacaagctcaagctgta
ttagagcgtgtactatgtgaaatagaggagaaagctggagttatcttggacgagcgagca
gaacatgaaagattggaagatgcttactctgtgctaagtgaaaaaatgcagcattccctc
tctcagcaagctgatttagagaggaatgttctggaattaaaggctgatctgagaagtcgt
gaccgtgattatgcagttgctcaggcagagatagttgacctccaagaacaggtgacagtt
cttttaaaggaatgccgtgatatacaactccgtggtggatcagtgggacctaaaaatgat
gattctgtggtgtcagattctgtatttatgtttggtgctgaatctaatgctgataatgct
ggaaggctgttgagctacaaggacataaacagtctggttgaacaaaatgtccagctaaga
ggcctagttcgcagccttagtgaccagattgagaacagagagttagagttgaaggaaaag
tatgagaaggagcttcagaagcatattgatgaagcttcctccaaggttaatgctgtactg
gaaagagctgacgaacagggaaggatgatcgaatcactccatacagctgtggcaatgtac
aaacggctttatgaagagcatagagttcattcatctgatactcaatctcaaaaattggcg
gaggttgaaagacaggaagtgatgcttttgcctgatacttcacatgaagctttagggaga
gcacaagaacgggcttttgagcgtgtaaaatgtctcgaagaagagtcatcaagattacgg
agcgagttaatctctcttcgatccgagcgtgagaagtcagctttggaagcacagtttgct
cgagataaacttgacagatatgtgaaagattttgagctccagagagaggagcataacgct
gtcctcatgagaaatgttgagttctcacagttgatagttgaccaccagaagaaactgcga
gaaagttatgagtcattgaatgctgctgaggagctttctcgaaagctaaaaatggaggtc
tctattctaaagaacgaaaaggatatgctgataaatgccgagaagagagcttctgatgaa
gtgtataatctgtcacagagagtgcacagtttgcaggcccatttagatacattgcagagt
acagaaaacgttcgtgatgaggcaagagctgctgagaggaaaaggcaagaagagtatatt
aaatgcattgagaaagaatgggcggaggctaagaaagaattgcaagaagagcgtgataaa
gttcgaaaccttatgcttgagcgagaaagtgattttaagaatgcattgagacgagctgag
gaaatggggaaagaattggccagcacttcacgttccttggctgctgccgaatctagagct
gttattgctgaggcacgatctactgatttagaggaaaaactgaaagcttcacaaggaaag
atgtctgagagagctgatgaaggtggtccttcctctgctactgagctttctggggacatg
cactctgctgaagaagttaaaacactcaaagaggagatgcaggctaacaaaaatcacatg
ctgcaatataaaagcatagctcaggcgaatgaagaagcattgaagcagttggaattggcc
tatgaggacctcaaagtggaagctgatagagtgaaaaaatcaatggaagaggaagcttta
tcgcttaggaaacacattactgatcttgagaatgaatgtactgtgaagtcaattgaagca
gcttctgcaactgcagggaaagaagaagctgttgctgctactttagctgaaatatccagt
ctgaaagaagataactctgctaagatgtcacagatttctaatttggagtctcaaataact
gctttgaaagatgatttggacaaagagcatcaaagatggcgtgccgctcaagttaattat
gagagacaggtaatcttgcagtcagaaacaattcaagaactgactagaacatctcaagct
ttggctgccttacaagaagaatcatctgagctccgtaaaatctcagatattctaaaaact
gaaaataatgaattgaaggccaagtggggggcagagatgtcggcgctagaagtatcaaaa
actgaagccgagaagaagtacactgaggctaatgaacagaacaagatattacttgatcgg
cttgagggtttgcacattaaactggctgagaaggaccgtgaatctttaggtacatcttct
ggaagcacgacggccgagagtgatgatgggttgatgaacgtagtgaattatctaagacgg
tctaaggatattgcagaaacagaaatttctttgctgagacaggaaaaacttcggttgcaa
tcgcaactcgagaacgctcagaggagggcagatatagcagaagcatcacttaattctgag
cgagagaattcaagagctcaggttttaaatgaagaggagtttaaagcactgcagcttcag
gttagagaactgaacttacttcgtgaaagtaacttgcaattgagagaggagaacaagcac
aactttgaagaatgccagaaacttcgcgaagctgctcagaagatgaagattgaagtagag
ggtctgcagaagctcctcaatgaaagacaagaaaatgtggaggcttgtaggaaagagatt
gaaatgcagaggctggataaggagcagctcgagagaagggttaatgagttggttgagagg
tgtaagagttttgatctggaagaatatgctagtctgaaagaagctgctcaacagatgcaa
gtgaatttgagagaaaaggatgcagaactggagaagattaagaaagtcatatctgagcag
cagaatctggtttctagcttagaacaagacctcacaaggagcagaacagaattgagtcag
agggaattgagaatcaacgaggttttgcaagctgaggcctctctgaaatccgaagttgat
aaactcagaaggttaattgctcaactgaagaagagggcagagaacttatcaaaggaaaag
gacaacttatcaaaggaaaaggacaacttatcaaaggaaaaggacaacatatcaaaggaa
aaggatgatttggctagagagaatcaagctctctccaaacaattggaagatgctaaactg
gggaaaagaactgctgatgctgcagatgaacaggccttgaaagacaaagaaaaggagaaa
gacaccagaatccaggggcttgagaagatggcctttcagctcagagaagagttgaaacaa
gggaaattaaagcgtttcaagactcaaaagacaataagtgactcctatgaaactgtgact
cagcaacggtccaagctattagatgaactggacaagcataagcaggctttgaagacgctt
accgatgaagttgagaaggtaaagcaagccaaaagcagtcaaacagagggcacatcagtg
gatcaactcctttccgggactcacttagaggacttcactgctgcatattttcaggctgta
gatgactttgaaagggttgcacgtggtgagctcggggttacaggtgccaccgacatttct
gctccagatgcttctgtttctggctcagttgtacctggtccagcagctgcgccttcgcca
ccagctagcttgttgacttccactcctgtggtgggaaaagttgttttatcaaagatgacc
tctgaaactcgtaaaacaggaaggaggttggttcgacctcgcattacaaagccagaagaa
ccttcagctgatgtagagatgcaagatacggatgtatctagcagcagtgggaagcacata
acaacacctcaaaatgcagaaaatctagataatgcaacattagcaactcaaccaccaatt
cgcaagcgcccttctgcagcgtctacctcagagttacaagaagagtcttctgccacgggt
gaaccctgcttagatgtggctcaacctgtgcttaagaagtccaaaggtctagaggcacct
caagaaggtggtgaagaaaaatctgttggtaatgtagaaatttcagaatctctgcctact
acagaggaacatgatgctggagatgaaacccaaggtttcaaagaggaagccagtgacact
gagaaggatgagactatgctttctggcgagcaggttgaagagccggcagttattgcaaca
aatcaggctgagtcacaggttgatagaacagatggtgcagatgatactttgggaaggcct
agtgaagtgtcaactccagataatgaatcaaagtttcaggtggaacaagagagagagcag
ctagcagctgacgaaagggaagagggagagctaattgctgatcctgaagatgttggaaat
ctcgagggaggtagcaatttattaatgggaagcccagaaaatttagaacctcaggctgaa
agcttagctggtactgatgaagacgccttgcttactccaacagacactggggagattgaa
tcttcccagctcccagatgatgataagaatgatgaagtcgatacaacagaagagctatct
gaaagctctgataagttgaatgatggcggtgaccaggttgctactgaaactgatcaggct
gtggatgctgttgttactggtgagaaaccatcaagcagttcagttgacagtagcatttca
aaagaagggggggcgggtgacactgctgcagctgaaacagaagaagggaaacaggtttca
cctgtcaataggagctcaagaaccataaacttgaatgagagggctagagaaagggcttcc
cttaggcaggctggtatgctttcctctacgatgccaagaggccgtggccgagctcctcgg
ggtcgtggtgggcgcaatgtgcgtggtggtcgcggtcaaacccctggttcacagggttaa
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integrated database retrieval system