Nicotiana attenuata (coyote tobacco): 109239420
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Entry
109239420 CDS
T05870
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109239420
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109239420
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Peptidase_C24
Motif
Other DBs
NCBI-GeneID:
109239420
NCBI-ProteinID:
XP_019261531
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MAMGSLLSKKWLSFSLSSLLLLLLLVRVYAGVQTTDSSDVRTVEKVQLKSSENSKMAVSL
EEVEEKLSKHAVDDPEEVVSMVAESIRNSTERRKLGYFSCGTGNPIDDCWRCDRNWQKNR
KRLADCGIGFGRNAIGGRDGRYYVVTDSRDDDPVNPRPGTLRHAVIQEEPLWIVFKRDMV
IQLKQELIMNSFKTIDARGYNVHIANGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSP
THFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHFAHHNEVM
LLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANP
TINSQGNRYLAPTNPFAKEVTKRVDTAAGQWKGWNWRSEGDLMLNGAYFTPSGAGASASY
ARASSLGAKSSSMVGAITSGAGPLACRRSRMC
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgggttcgttgctttcgaagaaatggctttcatttagtctcagttctctgctt
cttcttttgctgctcgtccgagtttacgccggtgttcagactaccgacagttccgacgtc
aggacagtggaaaaagtgcagttgaagagctctgaaaactcaaaaatggcggtgagtttg
gaagaggttgaggagaaattaagcaaacatgcagtggatgatccagaagaagttgtgtcc
atggttgcagagagcattaggaacagcactgagaggcgaaaacttggatatttctcatgt
gggacaggaaatccaattgatgactgctggcgttgtgaccgcaattggcaaaagaaccgc
aagcgccttgctgattgtggcattggatttgggcgcaatgccattggtggtcgcgatggt
cgttactatgttgtcactgattcgcgcgacgatgatcctgttaaccccaggcccggtacc
cttcgccatgctgttatccaggaggagcccctatggattgtgttcaaacgtgacatggtc
atacaattgaaacaggagctcattatgaacagtttcaagaccattgatgcccgtggctac
aatgttcatattgccaatggtgcttgtatcactatccagtttgttaccaatattattatc
catggtcttcacattcatgattgcaagccaacggggaatgctatggtgaggagctcgccg
acccatttcggctggaggacaatggctgatggtgatgcggtttctatctttggctcaagc
cacatatggattgatcataactcactctctcactgtgctgatggtcttgttgatgctgtt
atgggctcaactgccattactatttctaacaatcatttcgctcatcataatgaggtcatg
ctattgggccacagtgactcctacactagagacaagcagatgcaagtgacaattgcctat
aaccactttggagaaggtctcattcaaagaatgccaaggtgcagacatggctacttccat
gtggtgaacaatgactacactcactgggagatgtatgctattggtggaagtgctaacccc
accatcaacagccaaggaaatagataccttgccccaactaatccttttgcaaaggaggta
acaaaaagggttgacacagcagcaggtcaatggaagggttggaactggagatcagaggga
gacttgatgcttaatggtgcctatttcactccatcaggagctggagcttcagcaagctat
gcaagagcttcaagcttaggtgccaaatcctcttctatggtgggcgccataacttcaggt
gctggtccccttgcttgccgcagaagccgcatgtgctag
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