Nicotiana attenuata (coyote tobacco): 109239736
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Entry
109239736 CDS
T05870
Name
(RefSeq) probable E3 ubiquitin-protein ligase HIP1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109239736
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109239736
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109239736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
zf_RING_Vps8
zf-ANAPC11
zf-RING_16
PHD
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
109239736
NCBI-ProteinID:
XP_019261862
UniProt:
A0A314L9M7
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MSHGNYIFDLEADQQGQEFFHSEPCIFYGSLAALPQPNVHTVIPAPGNAGNIYLHHLADH
QHGVTRYNAVQHQHPTTNLDLAVSASSNHYNPYMAVPSASRDFPIPINHGPHDQLQSSSH
NILGMNSDSYGRNNHYMDDIRSSFKRKNAEGIPANLQYHHALAGSSSSVAPVITRAHESD
VLMDAASFTPPNYAGNSSSFIEDGAPRSMSNRSGASGPDNVAARNHNHLFQGSYAGQAHQ
LPGNPWLDRQFNSNGSETQTWAWNHAAPLPYVPDAGNMGVQGYQITSSNGGLNSFQHPPI
PQGHPSLHHLPPNFQGMRGQAITFPPQMTASSRRHLLPNNSSNITTNLLQGAVEAGPRYM
PSLPTAFGLYRPHRRAVVLERNTRHRNLPNMRVLPEDGVAMLDIPVYHEVNNPPIDQHRD
MRLDIDHMSYEELLALGEQIGNVTTGLSDEIIISHLKTRTFSSPGIPCLLESAACLDHET
DFCVICQADYDDQETIGTLDCGHEYHAECVKKWLVVKNTCPICKSTGLSIAGKNL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacggtaattatatatttgatttggaagcagatcagcaaggtcaagagttcttt
cattctgagccttgcatattttatgggagcttagcggctttaccacagcctaatgttcac
acagtaattccagctcctggaaatgctggcaatatctatttgcaccatctagcagaccat
cagcatggggtgacacggtacaatgcggttcaacatcagcatccaaccaccaatcttgac
cttgccgtttctgcttcatcaaatcactacaatccctacatggctgttccatccgcttct
agagacttccccattccaataaatcatgggccacatgatcagcttcaatcaagctctcac
aacatccttggaatgaattcagacagctatggaaggaacaatcattacatggacgatatc
agaagctcatttaagagaaagaatgctgaaggaatccctgcaaatcttcaatatcatcat
gctttggcaggctccagttcttctgttgctccagtgattacaagggcacacgaatctgat
gtcttaatggatgctgcatcatttacaccaccaaattatgcaggcaattcatcatcattc
attgaagatggagcaccgagaagtatgagtaacagatctggtgctagtggtccagataac
gtggcagcacgtaaccataatcatctatttcaaggaagctatgcaggtcaagcccatcag
ttgcctggcaatccttggttggaccggcagttcaacagcaatggtagtgagactcaaact
tgggcctggaatcatgctgctcctttaccctatgtacctgatgctggaaacatgggcgtg
caaggttatcaaataacatccagcaatggaggtttgaatagttttcaacatccacccatt
cctcaagggcacccaagccttcatcatctgccacctaattttcaaggaatgagaggacag
gctatcaccttccctccacaaatgacagcatcctcacgcagacacctactaccaaataat
tcctccaacatcaccaccaacctattgcaaggcgctgtagaggcaggaccaagatatatg
ccctcgctaccaactgcctttgggttgtacagacctcatcgaagggctgtcgtgcttgaa
cggaatactagacatcggaaccttcctaacatgagagttctgccagaagatggagtggca
atgctggatattccagtctaccatgaagttaataacccccccattgatcagcacagagat
atgcgtttggacatagatcacatgtcctatgaggagcttcttgcactgggggagcagatt
ggcaatgtaacaactggattgtcagatgaaataatcattagccatttgaaaaccagaaca
ttttcgtcccctgggattccctgcctcctggaaagcgctgcatgtttggatcacgaaact
gatttctgtgtcatatgccaggctgattacgacgaccaagaaacgataggaactcttgac
tgcgggcatgaatatcatgcggagtgcgtaaagaagtggttggttgtgaagaacacttgt
cccatctgcaaatccacaggattgtcaatagcaggaaagaatttgtga
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