Nicotiana attenuata (coyote tobacco): 109240081
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Entry
109240081 CDS
T05870
Name
(RefSeq) lariat debranching enzyme-like
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nau03041
]
109240081
03009 Ribosome biogenesis [BR:
nau03009
]
109240081
Spliceosome [BR:
nau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109240081
Ribosome biogenesis [BR:
nau03009
]
Eukaryotic type
90S particles
RNase
109240081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
109240081
NCBI-ProteinID:
XP_019262244
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MRIAVEGCMHGDLDNVYATLLQLQEVENIKIDLLLCCGDFQAVRNEKDLESLNVPVKYRS
MNSFWKYYSGEKVAPFPTIFIGGNHEASNYLWELYYGGWAAPQIYFLGFAGVIKFGNIRI
GGLSGIYKSHDYNRGHYEKLPYNQRDIRSIYHVREYDVHKLLEVEEPIDIFLSHDWPVGI
TDCGNLKALLRQKPFFEQEIQEGTLGSRPAAELLAKLRPSYWFSAHLHCKFAALVQHEKD
GPSTKFLALDKCLPGRKFLQVIEIESGPGPHELQFDEEWLAITRKYNAVLPLTTRRANYS
GVHLDTEQCHQFVRNKLQTRGSKPFEFVQTAPCYNPSHPVANDVFHGFYKNPQTEALLQF
LELEYLLNKMPESREPAAGSCNYESEDIPIDDVDVDVDVDVDDIKQVDSEDA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaggatagcagtagaagggtgtatgcacggagacttggataatgtctatgccacccta
ttgcagttgcaagaagttgagaatataaagattgatctccttttatgttgcggtgacttt
caggctgttaggaatgagaaggatctagaaagcttaaatgtgccagttaaataccggagc
atgaactctttctggaagtattactcaggagagaaagtagcaccatttccaactatattt
attggaggaaatcatgaagcatccaattacctttgggaattgtactatggaggatgggca
gcacctcagatatacttccttggatttgctggagtaatcaagtttggcaacattcgtatt
ggtggcctttccggaatttataaatcacacgactacaatcgggggcactacgagaagcta
ccttataatcaacgggatattcgatctatttatcatgttcgcgagtatgatgttcacaag
ctcttggaagttgaggaaccaattgatatctttctttcacatgactggcctgttggcatc
actgactgtgggaacttgaaagctcttcttcgtcagaagcctttctttgagcaagagatt
caggaaggaactctgggaagcagacctgctgctgaattactggcaaagttgaggccttct
tactggttttctgcacatctgcactgcaaatttgctgctttagttcagcatgagaaggat
ggtccttccacaaagtttcttgcccttgacaagtgcctccctggtagaaagtttttgcag
gttattgaaattgagtccggaccaggacctcatgaacttcaatttgatgaagaatggttg
gcaatcacaagaaagtataatgctgtcttgcccttgacaaccaggcgtgcgaactatagt
ggtgtacatcttgacacagaacaatgccaccagtttgtaagaaataagctgcagacaagg
ggatccaaaccatttgaatttgttcagactgcaccgtgctacaatccttctcaccctgtt
gctaatgatgtcttccacggtttctataaaaaccctcagacagaagctctattacagttt
ctagaactcgagtatcttcttaataaaatgccagaatcaagggagcctgctgcaggttcc
tgtaattacgagagtgaagatatacccatagatgacgtggacgtggacgtggacgtggac
gtggacgatataaaacaagtggactcggaagatgcttaa
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