Nicotiana attenuata (coyote tobacco): 109240085
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Entry
109240085 CDS
T05870
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109240085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109240085
04121 Ubiquitin system [BR:
nau04121
]
109240085
03036 Chromosome and associated proteins [BR:
nau03036
]
109240085
03400 DNA repair and recombination proteins [BR:
nau03400
]
109240085
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
109240085
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
109240085
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109240085
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
109240085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_2
BRCT
zf-HC5HC2H
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-HC5HC2H_2
RTT107_BRCT_5
zf-RING_6
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
PHD_NSD
PTCB-BRCT
zf-RING_10
zf-rbx1
zf-UDP
Motif
Other DBs
NCBI-GeneID:
109240085
NCBI-ProteinID:
XP_019262251
UniProt:
A0A314L9Z3
LinkDB
All DBs
Position
Unknown
AA seq
992 aa
AA seq
DB search
MADISHLEKMGRELKCPICLSLLNSAVSLTCNHVFCNLCIQTTMKSGSNCPVCKVPFHRR
EIRPALHMDNLVNIYKNMEVASGVNIFVTQTNPSSRVSGEDNQSNGKQTCGLPDEGKTVT
EAPATDNQKRKRGKGSKKSSECNKKNTGSNLIRPSFPTKKRVQVPKYPPLETPPPAKLAG
GNGKSITNEAQKPLVIEKDRSMLNEKGEPVLSPFFWLREEEDVERSSQQTDGYIIMDTPP
VIPCFSDIKDMDDEVHCEMSPKSGTRNAANGADLFDSEMFDWTQRACSPELSSSPYKTKI
KDTDCAAAQEKTRLPSLKRHSVESATQDRTTVVNVEGTDKEQLKSHSLFPLENEITGTKG
VVCNSSKSKALRCTKKKQGKKIIGEVSEFHNNLQKAAEKTMKNNQEDAYALNSKNKDLKN
KKKGSSATNVTGSAIEDISTSCRAKRLRKSSQPKSFDMSTLGDQEKHSEGSIETLDLKAC
HKQDQRSIGEQNKIRFRPKCRQRTAKDNITQIQDEPLHLAANRLLPMHNDGEATPSGTQI
KTCELECDGKLHGKKKVKFSEDEQLADKENITLEKIQKRVHKSLETEKSVSDVNGLVLRK
CEASSNKIQCAFCRSAEESEISGVMISYLNGKPVKEDVNGVSGVIHVHKHCAEWAPNVYF
EEDDAVNLEAELKRSRRITCFFCGVKGAALGCYETSCRKSFHVPCAKLTPECRWDYDNFV
MLCPLHANSKLPCEVPGKQSRIKESIKRSSNIHQPKVSATPDNAATSQWKSQKKNKSLVL
CCSALTADEKELVSSLKRLSGVTVVKNWDLSVTHVIASTDEKGTCRRTLKYLMGVLAGKW
ILSIDWIIACLEATEFVDEQQYEIKMDAHGIMDGPKLGRSRILNKQPKLFNGYKFFFMGG
FSPSYKSYLHDLVIAAGGIILNRKPVAVNQEILSPGCLAPFVIYSREQLDKSEVIEKKRS
DAEALASSTGAVAASSTWILNCIAGSKLLELE
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggcagatatttcacatcttgaaaaaatgggaagagagctcaagtgtcccatctgcttg
agtctgttgaattcggctgtttcacttacatgcaatcatgtattttgcaatttatgtatt
cagactactatgaaatcagggtccaattgtccagtgtgcaaagttccttttcatcgcaga
gaaatccgacctgctctgcacatggataatttggtgaacatctataagaacatggaagtt
gcttcaggagtcaatatatttgttactcaaaccaatccgtcatccagagtatcaggtgaa
gacaaccaatctaatggcaaacaaacttgtggactcccagatgaaggtaaaactgtaact
gaggctccagccacagataatcagaaaagaaaaagagggaaagggtcaaaaaaatcttca
gagtgcaacaaaaagaataccggatcaaatcttattagaccttcttttccgacaaaaaag
agagtgcaggtgccaaaatatccacctctagagactccgccacccgcaaagttggctggt
ggaaatggtaaatccatcaccaacgaagctcagaaacctttggtgattgagaaagacagg
tctatgctaaatgaaaaaggagaaccagtactatctccattcttctggctgagagaagaa
gaggatgtagaaaggtcaagtcagcaaacagatggatacattatcatggatacacctcca
gttattccatgcttcagtgatataaaggacatggatgatgaggtccactgtgaaatgtct
ccaaaaagtggaactcgtaatgcagcaaatggagcagatctttttgacagtgagatgttc
gactggacacaaagagcttgctctcctgaactttcttcaagcccctacaagacgaagatt
aaagatactgattgtgctgcagctcaagagaagactcgattgccctcactaaaaaggcat
agtgtggaatcagcaactcaggacagaacaactgtggtaaatgtagagggtactgataaa
gaacaactgaagtcacactctttatttcctcttgaaaatgaaatcactggtaccaaaggt
gtcgtttgcaattctagcaagagtaaggcacttagatgcactaagaagaaacaaggcaag
aaaataattggtgaagtgtcagaatttcataataacttacaaaaagcagctgaaaaaact
atgaagaacaatcaggaagatgcctatgcacttaactcaaagaacaaagatttgaaaaac
aagaaaaagggtagttccgctacaaatgtcacagggtcagcaatagaagacatttccact
tcatgtcgtgctaaaagacttcgcaagagcagtcagcccaagtccttcgatatgtctact
cttggagatcaggaaaaacacagtgaaggaagcattgagacacttgacttgaaggcatgt
cataaacaggaccagagatctattggtgaacaaaataaaattcgttttagaccaaagtgc
agacagagaactgctaaagataacattacacaaatccaagatgaacctttgcatttggca
gcaaatagattgcttcccatgcataatgatggggaagctactccttctggtacacaaatc
aagacatgtgagcttgagtgtgatggcaagcttcatggtaagaaaaaagtgaagttttct
gaagatgagcagcttgctgacaaggaaaatattacacttgaaaagattcagaagagagtg
cataaatcattggaaacagagaaatctgtttcggacgtgaatggattggttttgcggaag
tgtgaggcaagcagcaacaagatccagtgtgccttctgccgttcagcagaggaatctgag
atttcaggagtcatgataagctaccttaatggaaaacctgttaaagaagatgtcaatgga
gtatctggtgttatacatgtgcataagcattgtgcagaatgggcccctaatgtatatttt
gaagaagatgatgcggtcaaccttgaagctgagctgaagaggagtcggaggattacttgt
tttttctgtggagtaaaaggagcagctcttgggtgttatgagacgagttgtcgcaaaagc
tttcatgttccttgtgccaagttgacaccagagtgtcgatgggattatgataactttgtt
atgttatgccctttgcatgccaactctaagctgccatgtgaggtccctggaaagcagtcc
cggattaaagaaagtatcaaaagaagttctaatatccaccagcctaaagtctcagcaaca
cctgataatgctgctacttcgcagtggaagtctcagaagaagaataagagcttggtgctc
tgttgttcagctctaactgctgatgaaaaagagcttgtttcttcattaaagaggttgtct
ggagtgacagtagtcaagaactgggacctaagtgtcacccatgttattgcttctacagat
gagaaagggacatgccgaagaactctcaaatacttgatgggtgtcttggctgggaaatgg
atattgagcattgactggattattgcttgcttggaagccacagaatttgttgatgagcag
caatatgagattaaaatggatgctcatggcatcatggatggccctaagcttggaagatcg
aggattttaaacaagcaaccaaagcttttcaatggatacaagttcttttttatgggtggc
ttttcaccttcctacaagagctatctacatgaccttgttattgctgctggaggaattatc
ctcaacaggaagcctgtagcagtgaatcaggaaattctttcacctggatgccttgcacct
tttgtaatttatagtcgcgagcaacttgataagtctgaagtaatagaaaaaaaacgatct
gatgcagaagctttggctagttccaccggagctgtagcggccagcagcacttggattctg
aactgcattgctggctccaagttgctggagctggaatag
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