Nicotiana attenuata (coyote tobacco): 109240114
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Entry
109240114 CDS
T05870
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Module
nau_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109240114
Enzymes [BR:
nau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
109240114
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
109240114
NCBI-ProteinID:
XP_019262282
UniProt:
A0A314L9Y6
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MAMTTIGLVLILVLYSTLVITCNAAVVGGLLPQPVGGNNIADQTIFNVLNFGAKPNSPLI
STQAFMRAWRAACDFNGSARLFVPPGVYTLAETIFSGPCKGTHPIIVQIAGTLKAVADVS
EYSNFAWISFDSINGIIITGGGTLDAQGQALWQFNDCKTNPNCVHLPATLFFNGVENGKV
MRLNLINSMGFHIHITNSYLVRFHALTIDAPENSPNTDGIHISKSNTIKLSRSVIRTGDD
CVSFGQGANNVTVNKVTCGPGHGISVGSIGKLPGELEIKGLIVKNCTLRGTTNGIRIKTF
AGENPNRAIGMMFSDIVMENVKNPIIIDQSYGDKSTEPSQVRISDVIYQNIRGTTTSEVA
VQLMCSARLPCLNVRLTNINLKHIANTPITSQCQNANVGYTGIQLPPPCHGPSS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggccatgactacgattggtttagtcctcatccttgtgttgtattcaactttggttatt
acgtgcaatgcagctgtagttggtggccttcttcctcaacctgtaggcggcaataatatt
gctgatcagaccatttttaacgtcttgaattttggtgccaaacctaactcaccacttata
agtacacaggcatttatgagggcatggcgagcagcttgtgatttcaatgggagtgcaaga
ctttttgtaccacctggagtatatacactagcagagaccatattttcaggaccatgcaaa
ggaacacatcctataattgttcaaattgcaggaaccttaaaagcagtggctgatgtttct
gaatattcaaactttgcttggatttcatttgattcaattaatggcattattatcactggt
ggaggcactttagatgctcaaggtcaagctctttggcagtttaatgactgtaaaaccaat
cctaattgtgtccacctccctgctaccttattcttcaatggtgtagagaacggaaaagta
atgaggctgaatttgataaatagcatgggatttcatatacatattactaatagctattta
gtaaggttccatgcccttaccattgatgctccagaaaacagcccaaatactgatggcata
cacataagcaaatctaacactataaaactctccagaagtgtaattagaacaggggatgat
tgtgtctcatttggacaaggagcaaataatgtgaccgttaacaaagtcacctgtggccct
ggccatggcattagtgtcggtagtattggtaagttgcctggcgaattggaaattaaagga
ctcatcgtgaaaaattgcacgttgaggggcacaacaaatggtatcagaatcaaaactttt
gcaggagagaatcctaacagagcaatagggatgatgttcagcgatattgtgatggaaaac
gttaaaaatccgatcatcatagaccagagttatggtgacaaatcaaccgagccatcacaa
gtaagaataagtgatgtaatttaccagaacataaggggaacaacaacaagtgaagtagca
gtgcaattgatgtgcagtgcacgactcccttgcctaaatgttcgacttaccaacataaat
ttgaagcatatagcaaatacgccaattacttctcaatgtcaaaatgcaaatgttggctat
actggcatccaattaccacctccttgccatggaccctcttcatag
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