Nicotiana attenuata (coyote tobacco): 109240214
Help
Entry
109240214 CDS
T05870
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04120
Ubiquitin mediated proteolysis
nau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109240214
04120 Ubiquitin mediated proteolysis
109240214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109240214
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109240214
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
U-box type E3
109240214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF2730
Motif
Other DBs
NCBI-GeneID:
109240214
NCBI-ProteinID:
XP_019262394
UniProt:
A0A314L8F4
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MATTKPQRTPAEIEDIILRKILLVTLVDSMENDTRVVYLEMTAAEILSEGKELRLSRDLM
ERVLIDRLSGNFVSAEPPFQYLINCFRRAHEEGKKIASMKDKNVRSEMELVVKQVKKLAV
SYCRIHLGNPDMFPNWDTAKSSVSPLLPLVFSEVSSSVDAFGGGGGSGGVTCPPGFLDEL
FKEGDFDSMDPILKQLYEDLRGTVLKVSALGNFQQPLRALLYLVKYPVGAKSLVNHPWWI
PKSVYLNGRVIEMTSILGPFFHVSALPDNTIFKSQPDVGQQCFSESATRRPADLLSSFTT
IKTVMNNLYDGLAEVLMSLLKNTAIRENVLEYLAAVINKNSSRAHLQVDPLSCASSGMFV
NLSAVMLRLCEPFLDANLTKRDKIDPQYVFSSTRLELRGLTALHASSEEVSEWINQNNPG
KVDVSKEGSDGENRLLASQEATSSGNDSGGPSILHNSRPISSSSEKAKYPFICECFFMTA
RVLNLGLLKAFSDFKHLVQDISRSEDHLSTMKTMLEQAPSPQLQQEISRLEKELELYSQE
KLCYEAQILRDGGLLQRALSFYRLMVIWLVGLVGGFKMPLPSPCPMQFASMPEHFVEDTM
ELLIFASRIPRALDGVLLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRRSGSTA
TSTLFEGHQLSLEYLVKNLLKVYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRN
AWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQER
QERTRLFHSQENIIRIDMKLANEDVSLLAFTSEQITAPFLLPEMVERVASMLNYFLLQLV
GPQRKSLSLKDPEKYEFRPKELLKQIVKIYVHLARGDKENIFPAAITRDGRSYSDQIFSA
AADVLRRIGEDMRIIQEFIDLGAKAKVAASEAMDAEAALGDIPDEFLDPIQYTLMKDPVI
LPSSRITVDRPVIQRHLLSDSSDPFNRSHLTADMLIPDTELKAKIEEFIRSHELQKHGED
LNLQNTKTTIQTTDTSNLIE
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggcgactactaaaccacagagaacgccagcggagatcgaggacataatacttcggaaa
atcctcctcgtaaccctagttgattcaatggaaaacgatacacgtgtcgtgtatttagag
atgacggcggcggagattttaagcgagggaaaagaattaaggttatctagggatttaatg
gagcgggtcttaatcgatcggctttcaggtaattttgtatcggctgaacccccttttcag
tatttaatcaactgtttccgtagggcccacgaagagggcaagaaaattgcatcgatgaag
gataaaaacgtcaggtctgagatggaattagtggttaaacaagttaagaagcttgcggtt
tcttattgtaggatacatttagggaatcctgatatgtttcctaattgggatacagcgaaa
tcgagtgtttctcctttgcttcctttggtgttttcagaggtttcaagctctgtggatgcg
tttggtgggggtgggggtagtgggggagtgacatgtccacctgggtttttggatgagttg
tttaaagaaggggattttgatagtatggacccaattttaaagcagttgtatgaggattta
agagggaccgtgttaaaggtttcagctttgggtaattttcagcagccacttagggcttta
ttgtacttggttaagtatcctgtgggcgcaaagtcattggtgaatcatccttggtggatt
cctaagagtgtgtatttgaatggaagggttattgagatgacaagtattttgggtcctttc
tttcatgtcagtgctttgcctgataatacaatctttaagagtcagccggatgttggccag
cagtgtttctcggaatcggcaacacggcgtcctgctgatctcctgtcttctttcacaaca
atcaaaactgttatgaataacttgtatgatggcttggcagaagtccttatgtctcttctg
aaaaatacagccattcgtgaaaatgtccttgaatatctcgcagcagttataaacaaaaat
tcttcaagggctcatttacaggttgatccattatcttgtgctagttcaggcatgtttgta
aatctcagtgctgttatgcttcggctctgtgaacctttcttagacgccaatttgacgaaa
agggacaagattgatccccaatatgtgttttctagcacccgtctggaactgaggggattg
actgctctgcatgcatcatcagaagaagtttctgaatggataaatcaaaataatccaggg
aaagttgacgtctctaaagaaggcagtgatggagaaaatcggctgttggcatctcaggaa
gctacaagctccgggaatgattctggtggaccttctattctccacaatagcaggccaata
tcaagtagtagtgaaaaagccaaataccccttcatatgtgaatgcttcttcatgactgca
agggtgctcaacctgggtctcctaaaagcattttcagattttaagcatcttgttcaggac
atttcaagatctgaagatcatttgtctactatgaaaaccatgctagaacaagcaccctca
ccacagttgcagcaggaaatatctcgcttggagaaagaacttgagctgtattcacaggag
aaattgtgctatgaagcccaaatactgagggatggagggcttctccagcgtgcattatcc
ttctacaggttgatggtcatttggctggtcggccttgttggtggctttaagatgccttta
ccttccccttgccctatgcagtttgcttctatgcctgagcactttgtggaagataccatg
gagctgctaatttttgcttctcgaattcctagagctttggatggtgtcttactggacgac
ttcatgaatttcattatcatgttcatggcaagtccagaatatatcagaaacccttatctt
agagcaaagatggttgaagtcctaaactgttggatgccccgtagaagcggctcaactgca
acgtctactttgtttgagggacatcaactctctctggagtatcttgtgaagaatcttttg
aaggtttatgtcgacattgaatttacaggatcccacacccagttctatgataaatttaat
atccgccacaacattgctgaactacttgaatatctttggcaagttccaagtcacaggaat
gcatggagacagattgccaaggaggaggagaagggtgtttatttgaatttcttaaacttc
ttgattaatgatagcatctatcttctcgatgaaagtcttaataaaattcttgaactaaaa
gagctagaagctgaaatgtctaacacagcggaatgggagcgaagaccagctcaagaaagg
caggagagaactcgcctgttccattcacaagagaatataattcgaattgatatgaagttg
gcaaatgaagatgtgagcctgctagcatttacttcagagcaaattaccgccccttttctt
cttcctgagatggtggagagagttgctagcatgttgaattactttttactacagctggtg
ggtccacaaagaaaatctctcagcttgaaagaccctgaaaagtatgagtttcgtccgaaa
gagttgttgaaacagattgtgaaaatatatgtgcatttggcgagaggggataaggagaat
atctttccagctgcaattacaagagatggtcgatcgtacagtgatcagatatttagtgct
gcagctgatgtccttagaagaattggtgaagatatgaggatcattcaagagttcattgac
cttggcgcaaaagccaaggttgcagcttcagaagcaatggacgctgaggctgcgcttgga
gacattcctgatgaattccttgatcctatccaatatactttgatgaaggatcctgtcatt
cttccctcttcaagaataacagtggaccgacctgttattcagaggcaccttcttagtgat
agttcggacccgtttaaccggtctcatctaactgcggacatgctgattccggacactgag
ttgaaggcgaaaattgaagagttcattcggtcccatgaattgcagaagcatggggaagac
ttgaacttgcaaaacacaaaaacaacaatacaaacaactgatacttcaaatttaattgag
tag
DBGET
integrated database retrieval system
