Nicotiana attenuata (coyote tobacco): 109240319
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Entry
109240319 CDS
T05870
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03018
RNA degradation
nau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109240319
09123 Folding, sorting and degradation
03018 RNA degradation
109240319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109240319
03041 Spliceosome [BR:
nau03041
]
109240319
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109240319
mRNA degradation factors
5'-3' decay
Lsm complex
109240319
Spliceosome [BR:
nau03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109240319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
109240319
NCBI-ProteinID:
XP_019262487
UniProt:
A0A314L7Z9
LinkDB
All DBs
Position
Unknown
AA seq
146 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
VRGNTIKYLRVPDEVIDKVQEEAKSRTDRKPPGVGRGRGRGGRDDSAAGRQGKGYGRGMD
DGGAKGRGKGGPSAKSGGRGGGRGRG
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgctcccactctctctgctcaagactgcacaggggcatcccatgttggtggaactaaaa
aatggggaaacgtataatggacatttggtcaactgtgatacctggatgaatatccatctt
cgtgaagttatctgtacttcaaaggatggagatagattttggagaatgccagaatgttac
gttcgtgggaatacaataaaataccttcgagtacctgatgaggtgattgataaggttcag
gaggaggcaaaaagccgtacagatagaaaaccgcctggtgtaggacgtggaaggggaaga
ggaggtagagatgacagtgctgcggggagacaaggaaaaggatatgggcgtgggatggat
gatggaggtgccaaaggccggggcaaaggaggacctagtgccaagtctggtggcagaggt
ggaggtcgcggacgtggctaa
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integrated database retrieval system
