Nicotiana attenuata (coyote tobacco): 109240572
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Entry
109240572 CDS
T05870
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04120
Ubiquitin mediated proteolysis
nau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109240572
04120 Ubiquitin mediated proteolysis
109240572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109240572
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109240572
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109240572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
FlxA
zf-ANAPC11
zf-RING_16
zf-RING_5
zf-RING_11
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
109240572
NCBI-ProteinID:
XP_019262769
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MMRLQTYAGLSVIATLAAIYHAFSSRGQFYPAMVYLSTSKISLVLLLNMGLAIMCFLWQL
TKKVFLGTLREVEVERLNEQSWRELMEILFAITIFRQDFSVMFLAMVTRLLFIKSLHWLA
QKRVEYIETTPAVTKLSHIRIVSLMGFLLLIDSIFLYNYMNHLIQTRQASVSLFFAFEYM
ILTTTTVATFVKYVFHVCDMLMEGQWERKAVYTFYLELIRDLLHLTMYMCFFLMIFVNYG
VPLHLIRELYETFRNFKSRVADYIRYRKITSNMNDRFPDATPEELNGGDTICIICREEMI
TAKKLVCGHLFHVNCLRSWLERQHTCPTCRALVVPPENGTNVARSRYAQQGPGTSFTPQG
SQADPRTNSHVSQHQARLQAAAAAAAIYEKSIVYPSAQILPCYVGANMPFGDSSWNNLST
SDTQLEAHRIFLQQQIEVLRSQLMLLQSSKTQKAAAAVGASDGKGKAISFESAQKGQAEG
ADI
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgatgagactacaaacttatgccgggcttagtgtaatagctacactagctgctatttat
catgcctttagcagtagaggccagttttacccagcaatggtttatttatcgacatctaag
atcagtctggtgcttctcctcaacatgggtctcgccattatgtgctttttatggcagctg
accaagaaagttttccttggtactcttcgggaggtagaggtggagaggctaaatgaacaa
tcatggcgggaactcatggaaatactttttgcaattactattttccggcaagacttctct
gtgatgtttcttgccatggttaccagactattgtttatcaagtctttgcattggttggct
cagaaacgggttgagtatattgaaacaactccagcggttactaagttgtcccacattcgg
atagtctctttgatgggcttcctcctcctcattgatagtatctttttgtacaactacatg
aaccatttgatacagacaagacaggcttctgtttctctcttctttgcatttgagtacatg
atactcactacaacaactgttgcaacatttgtgaaatatgtattccatgtatgtgacatg
cttatggaaggacaatgggaaaggaaggccgtatatactttctacttggagcttattcgg
gacttgctccacttgactatgtacatgtgcttcttcctcatgattttcgtcaattatggt
gtgcctctgcacttgattcgggaactttatgagacattccgcaacttcaagagtcgagtt
gctgattacatacgctatcgaaaaatcacttcaaatatgaatgatcgttttccagatgct
acaccggaagagctcaatggaggtgataccatctgtatcatctgtcgtgaggagatgatc
actgccaagaaacttgtttgtggacatctctttcatgttaattgcctccggtcatggcta
gaacgtcagcacacatgtcctacatgcagagcccttgttgtaccacctgaaaatgggacg
aatgttgcacgatctcgatatgctcagcaaggcccaggaacaagttttacacctcaaggt
tcgcaagcagatcccaggacaaacagccatgttagccagcaccaggctagactccaagct
gcagctgctgctgctgcaatttatgagaagtccattgtttatccttctgcacagattcta
ccctgctatgttggtgctaacatgccttttggagatagttcttggaacaaccttagtact
tcagatactcagctggaggcccataggatattcttacagcagcagattgaggttctgcga
agccagctcatgcttctacagagttcaaagacgcagaaagcagctgctgctgtaggagct
tcagatggcaagggaaaagcaatttcgtttgagagtgctcaaaaaggacaggctgaaggt
gcagatatttaa
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integrated database retrieval system
