Nicotiana attenuata (coyote tobacco): 109240912
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Entry
109240912 CDS
T05870
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nau04812
]
109240912
Cytoskeleton proteins [BR:
nau04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
109240912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_IFT140_1st
eIF2A
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_IP5PC_F
PROPPIN
VPS8_N
Motif
Other DBs
NCBI-GeneID:
109240912
NCBI-ProteinID:
XP_019263140
UniProt:
A0A314L6U7
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MTTTKRAYKLQEFVAHSLSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHS
SGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISLDFHPFGEFFASG
SLDTNLKIWDIRRKGCIHTYKGHSRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLH
DFKSHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCMTFNPDG
RTLLCGLHESLKVCSWEPIRCHDTVDVGWSRLSDLNIHEEKLLGCSYNQSCVGVWVVDIS
RLEPYAMGNTARLNGHPDVKSNSGGNLSNLADDGTKASSGRLLISQICDPVKETKSFGRL
SVSQNLELQRDSRTLATTASAPGTPQRINLSVGAKAPPINTTAFPNTTGLKRNSAKAQSA
ANSSIVNRSEVIPIIVPRNNDRMEQVSEPRKEGVATRAMQLSLQTKVSDSRRFPTFKEDL
GRPNAVSQFDIEIPKAIEFSSTADKNNFPPVIAGAAATEKNVKDDKSLVSAKLETHSAPE
LFSGNQNENYETRGNVISRSAYPIEGQRRARTRSVVANWEKRDRIASHEGLASNNVVGIV
PALNMLSTNLRGHPSSAESVTVSATDEDTISDLLEQHDQFVGLMQSRLAKLQVVCQYWQR
HDIKGALSAMQKMADTAVLADVISFLTEKNDIITLEICTCLLPLLVGMLESSLDRHQDIS
LNMLLKLVKVFGSVIYSSLSAPASVGVDIEAEQRMDRYNLCFVELEKVKHWLPTLTRRGG
SIAKSAQELSLALQDVS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgactactactaagcgtgcttataagctacaggaattcgtagcgcattctttaagcgtg
aactgcttgaagattggacgcaagtcatccagggttcttgtaaccggaggagaagatcac
aaggttaacctttgggccattggcaaacccaatgccatcttgagtttgtcaggtcattca
agcggaattgattcagtcagctttgattcttcagaggtgttggtagctgcaggagcagca
agtggtactatcaagctttgggatttagaggaggccaagattgttcgcacgctcactgga
caccgatccaactgcatatcattggacttccatccctttggcgagttctttgcatctggg
tctctagatacaaacctaaagatatgggatatcagacgcaaaggatgtatccacacatac
aaaggtcacagtagaggtgtcaatgccatcaggttcactccagatggccgatgggttgta
tctggtggggaagacaatactgtcaagctttgggatttgactgcaggaaagcttttacac
gatttcaaatctcacgaagggcagattcagtgcatagactttcatccccatgagtttcta
ctggcaacaggttctgctgacagaactgtaaaattctgggacctcgaaacctttgagctc
ataggttcagctggacctgagacatcaggggtgcgttgtatgaccttcaatcccgatggg
agaacccttctctgtggtttgcatgagagtttgaaggtatgctcttgggaaccaattaga
tgtcatgatacagtagatgttggatggtctcggctgtcggatcttaatattcatgaagag
aaactccttggctgctcttacaatcaaagttgtgttggagtgtgggttgtggatatttcg
cgtcttgaaccatatgcaatgggtaatactgctcgattaaatggtcaccctgatgtaaaa
tcgaattcgggtgggaatttatccaatctggcggatgatggtaccaaagccagttctggt
agactcttgatttctcaaatttgtgatcctgttaaagagaccaaatcttttggaagactt
tcagtatcacaaaacttggagcttcaaagagattctaggacccttgctactactgcaagt
gcacctggcactcctcaaagaataaatctgagtgttggtgcgaaagcacctccaattaac
accacagcatttcctaatacaactggtctgaagaggaattcagctaaagcccaatcagca
gctaattcttccattgttaataggtcagaggtcatacccattattgttccaagaaataat
gacagaatggagcaagtatctgaacccaggaaagaaggagttgcaacaagggcaatgcag
ctgtcattgcagacaaaagtctccgattcacggaggtttccaactttcaaggaagacctt
gggagaccaaatgctgtgtcacagtttgacattgaaatccctaaagctattgaattcagt
agtacagcagacaagaacaacttccctccagtaattgctggagctgcagcaactgagaag
aatgtgaaggatgacaagagtctggtctcagcaaaacttgaaacgcattcagcacctgag
ttattttccggaaaccaaaatgaaaattatgaaacacgtggaaatgtcattagtaggagt
gcttatcccatagaaggtcaaagaagagcaaggacacggtctgttgttgcaaattgggag
aagagagataggatcgcatctcacgagggtcttgcttccaacaatgttgttgggatagta
cctgctctgaatatgctttccaccaacttgagagggcatccttcgtcagctgaaagtgta
acagtttctgctacagatgaggataccatcagtgacttgttggaacagcatgaccaattt
gttggcttaatgcaatctcgtttggccaaattacaggttgtctgtcaatactggcaaagg
catgacattaaaggggcacttagtgcaatgcagaagatggcagatactgctgtgcttgct
gatgtaattagctttttaacagagaaaaatgatattattacgttagagatttgcacatgc
cttctaccactccttgtgggaatgcttgagagcagcttggataggcatcaggatatttca
ttgaatatgctgctcaaacttgttaaagtatttggttcagtgatttattcttcattgtct
gcgccagcatcagttggtgttgatattgaggcagagcaaaggatggatcgctacaatctt
tgctttgttgagcttgaaaaagtcaaacattggctgcccactcttacaagaaggggaggg
tccattgccaagtccgcacaagagctgagtctagcacttcaagatgtttcgtga
DBGET
integrated database retrieval system
