Nicotiana attenuata (coyote tobacco): 109241343
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Entry
109241343 CDS
T05870
Name
(RefSeq) ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X1
Organism
nau
Nicotiana attenuata (coyote tobacco)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
DEAD
Motif
Other DBs
NCBI-GeneID:
109241343
NCBI-ProteinID:
XP_019263621
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MRERETHTRRGRKMSEEVNNKENVVTSGGGLTAEQKARISSKFRAAKALLARKRPLNDSC
TTSLQPLNKVGKSQRTESLHRIDGDERFPLTEIRMNTPSPISEKDSNKKLSGCTSVKGSL
VSELDKNVNGRTKCGTPFQSIETFMFSSDRSGSVKARLSENVDSVQVETMVGLDMYKTPV
RQPGFCELSESSLSSTVLDDDFDEHILDEIDALCEQKSKGKPEMKRFNNEPIENQHINNL
DEEDNLNPVVSSDSSAHECNQESEAEISKSSEPDNLNLVSSDEALKLVCALNSTGNQECE
IEEPKSSKAADTESKLEPTDIRNMPEDYIKYVESLNDRQQEAACSDISIPLIIVAGPGSG
KTSTMVGRVLMLLHKGIGPSNILAMTFTTAAASEMRERIGRVAGKTAAKELTISTFHSFS
LQLCRTHAEKLGRTPEFLIYGHGQQRRAVIEAVRLLDDKKKEPRDELHQLNDMNSPQHFK
EKSKKWLKFVTQAKAAGRTPEDYYKTGNETGAAVLQNYNDILKSCNALDYHDLISCSVKL
LTDFPEVFEECQELWKAIVIDEFQDTSAMQYGLLRTLASHKRITIVGDEDQSIFGFSGAD
ASGFDSFRKDFPLHKEVRLSKNYRSTRCIVEAASCLIQNNSKRCQSKRVLTDNPVGSKIT
IKECCNEDAQCSFIVDKILEITSNSTTDKSSFGDIAVLFRRQVSGKIFQAAFRNRKIQFN
VHGVAFYRKKVVRAIISMLRTTLPGSDDGSFRRVFKALLPSEKEEKKKVIEHIDKVSTVR
KSSFIEAARDIFSAKVSGTFKRSQLTQGRKVLLMIDMISKLVNREESISAVITSVANMIP
QKYLLEQRAVHDNDGGKLLNEDHDVRSVLQYLLDDVSDFLKTHNNPIKGESECKTEGQGC
ANILKAFIDHISERENENFRTRRHDNKDSVTLTTIHQSKGLEWDTVFIVKANESEIPLLH
EFNGITNERSNSIEEERRLLYVAMTRARKKLFILYVIMDSNWQVLQPSRFLREIPRHLQE
IQEEMTNHLKLQEETPRSGSAEKVESVDHKITLDDPLIDPVDGMSKESIDTMELYNSKSF
LKRFNAEDRAVVSHLFHQWAKKPAFQEPQRLLKKVGFVIDERLRVKKSTHKDVLRALKSS
LTCEEALHYAESVLNWEKIPAEKRAYLMREKQEYFQKLRIESAMGSSEPTPKQIAYLQSL
GCTTVPTSRLHASRLIEEYKSL
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagagagagacacacacacgcagaggtagaaaaatgagtgaagaagtaaacaac
aaggagaacgtggtgactagtggaggcggattaacggcggaacagaaagctcgaatttct
tcaaagttcagagctgctaaggcacttcttgctcgcaaaaggccactcaatgattcctgc
accacttcccttcaacccctcaataaagttgggaagtctcagagaactgaatccttgcat
cgcattgatggtgatgaaaggtttcctcttactgagattcggatgaacactccatcaccc
atctccgagaaggattctaacaaaaagctcagtggttgtaccagtgtaaagggctcacta
gtcagtgaacttgataaaaacgtcaatggaagaaccaagtgtgggacaccatttcagtca
attgaaactttcatgttttctagtgacagaagtggatcagtcaaagctagactaagtgaa
aacgtagatagtgttcaagtggagaccatggttgggttagatatgtataaaactccagtg
aggcaacctggattttgtgagttgagtgagtcatctttgtcatctactgttctagatgat
gattttgatgaacacattttggacgaaatagatgctttatgtgagcaaaagtcaaaagga
aagcctgaaatgaagaggttcaacaatgagccaattgaaaaccaacacataaacaacttg
gatgaggaggataacttaaatcccgttgtttctagtgacagttcagctcatgaatgcaat
caagaaagtgaagcagagatatcaaagagcagcgaacctgataatttaaatcttgtcagc
tcagatgaagcacttaaacttgtgtgcgctctgaattcaactggtaatcaagaatgtgaa
atagaggagccaaaaagttccaaggctgcagatactgagagcaagctagagccaacagat
atcaggaacatgcctgaggattatataaagtatgtagagtccctaaatgacagacagcag
gaagcagcttgtagtgacatttcaattcctctaatcattgtcgctggaccaggaagtggc
aagacatctacgatggttgggcgagtcctgatgctactgcacaagggtattggtccgtca
aacattcttgctatgacttttacaacagcggcagcttctgaaatgagggagagaattgga
agagttgcagggaagacagcagcaaaagagctcacaatcagcacgtttcactcgttttct
ttgcagctctgccgcacacatgctgagaagttaggccgaacacctgagtttctcatatat
ggacatgggcagcagagaagagctgtcattgaagcagttcgcttactggatgataagaaa
aaggagcctcgtgacgagcttcaccagcttaatgacatgaattctcctcagcattttaag
gagaaatcaaagaaatggttaaaatttgtaactcaagctaaggctgcaggacggacgcct
gaagactactacaaaactggcaatgaaactggagctgcagttcttcaaaactacaacgat
atattaaaatcatgcaatgctttggattaccatgacttgatcagttgttctgtcaagctt
ttgactgattttccagaagtttttgaagagtgccaggaattatggaaagcaatagtgatc
gatgagtttcaagacacaagtgccatgcaatatggacttttgcgtacccttgcatcgcat
aaacgcataactattgttggtgacgaagatcagtcgatttttggttttagtggtgctgat
gcctctggatttgattcatttcggaaagattttcctttgcacaaagaggtcagactaagt
aaaaattaccggtccacacgttgcattgttgaagctgcatcatgtctcatacaaaataat
tcgaaaaggtgccaatcaaagcgtgttcttactgataatcctgttgggtctaagataact
atcaaagaatgctgcaatgaggatgcacaatgttcgtttattgttgataaaatattagaa
attacttctaatagcacaactgacaagtcctctttcggcgacatagcagttctattccgg
aggcaggtgtcgggaaaaatctttcaggcggcatttcgtaatagaaaaatccaattcaat
gttcatggtgtggccttctataggaaaaaggtggtcagggccatcatttctatgcttaga
acaactttgcctggttctgatgatggttcgtttcgaagagtattcaaggccctactgcct
tcagaaaaagaagaaaaaaagaaggtgattgaacacattgataaagtttctaccgtaagg
aaaagtagtttcattgaagcagcacgagacatatttagtgctaaagtatctgggacattc
aagaggagtcaactcacccaaggacggaaggtgttgctcatgatagacatgatctcgaaa
ctcgtgaacagggaagagtcaatttcagccgtcattacttcagtggctaacatgataccc
cagaagtaccttcttgaacaacgggcagttcatgataatgatggagggaagctgcttaat
gaagatcatgatgttagatctgttcttcaatatctattggatgatgtgtctgattttcta
aaaactcataacaaccccataaaaggagaaagtgagtgcaaaacagaaggacaaggttgc
gccaacatactgaaagcttttatcgatcatatatctgaacgggagaatgaaaattttcgt
acaaggagacatgataacaaagactctgttacactcacgacaattcatcagtcaaaaggc
ttagagtgggatacagttttcatagtgaaggcaaatgaatcagagattcccttgttacac
gaatttaatggcatcacaaatgaaaggagtaactcaattgaggaggagagacgcttacta
tatgtggcaatgactcgtgcacggaaaaagcttttcattttgtatgtaattatggattca
aattggcaggttcttcaaccttcacgttttctgagagaaattcctcgtcatcttcaagag
atacaggaagagatgaccaatcacctaaagctccaggaggaaactcctcggagtggttca
gctgaaaaggtggaatccgttgatcataaaataacgctagatgatcctctcattgatccg
gttgacggaatgtccaaagagtcaattgacactatggagctgtacaattccaaaagcttc
ctgaaaagatttaatgcggaagaccgagcagttgtatctcatttgttccatcaatgggcc
aaaaagcctgcatttcaggaaccacagaggttgcttaagaaggtaggttttgtcattgat
gagcgccttagagtcaagaagagcactcacaaggatgttttacgtgccttaaagtcctca
ttaacttgtgaggaagctctacattatgctgaatctgtgttgaactgggagaagattcct
gctgagaagcgtgcttacttgatgagagagaaacaggagtactttcagaaactacggatc
gaaagtgcaatgggttcatcagaaccaactcccaagcagatcgcatatcttcagagtcta
ggatgcactacggttcctacatcccgtctccatgcatcccgactgattgaggaatataaa
tcactgtag
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