Nicotiana attenuata (coyote tobacco): 109241479
Help
Entry
109241479 CDS
T05870
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nau03021
]
109241479
Transcription machinery [BR:
nau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
109241479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
HTH_31
Motif
Other DBs
NCBI-GeneID:
109241479
NCBI-ProteinID:
XP_019263762
UniProt:
A0A314L5M8
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MGFRLHLKWGFSVQPPFSPNSASAWPSSHSFKGKEALYDPARSLKPFINGDCEPSHSDPF
RVRTCLSDPQLWTSDISVTTEIKTRIGRGSPSNIYGDIGSDKIGISPDGEKPLYLNTTRA
PHFSLLMKNIDLLENMFADSEMSRLENNILVQLEKLGALEFFHSRLSRTLHSTFPEVLDV
PRDLIEEIEKDDLVGNGINKVVVRSRKKQERKSRRNRASGIANDIITVHPHTKNIQEDMQ
QPKFYSGKRTHASRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEA
AGVEQKELQHHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAV
RFDDTRGYKFSTYVQYWIRKSLSKLVAQHARGIRIPFTICKAINQIHKARKALSRSHGKF
PGDNEIAKYTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPDKSIVSPEESVMR
EDIIDNMYALLESLDPKEQQVIYFRFGLENHQRKSLEEIGRLYGVSKEWIRRIERRALTK
LRSADCFQDLTHYSV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggttttaggctgcacctcaaatggggtttctctgtccaacctcctttctcccccaac
tcagcatcagcatggccttcttcacattctttcaaaggaaaggaggctttatacgatcca
gctcggtctctcaaaccttttatcaacggggactgtgaaccttcacatagtgatcctttc
agagtgcggacttgtttatctgacccccaactgtggactagtgatatatcagttactaca
gaaataaagacacgaatcggcagaggatcccctagcaatatatatggagatattggcagt
gataagattgggatatcacctgacggggaaaaaccattatatttaaacacaaccagagcc
cctcattttagtttactaatgaaaaatattgatttgctggaaaacatgtttgctgattca
gagatgtcaagattagaaaacaatattctggtgcaactagaaaagcttggagctttagaa
ttctttcatagtcgtctctcaagaacacttcattctacttttcctgaagtgcttgacgtg
ccaagggatcttattgaagaaattgaaaaagatgaccttgttggaaatggaataaataag
gtagtcgtacgttctagaaaaaagcaagagcggaagtcaagaagaaacagagcatccgga
attgctaatgacattattacagtgcatccacataccaaaaacatccaggaggatatgcaa
cagccaaagttttattctgggaaaagaacacatgcttctagaaataaaagacagaagatt
gctaagaatgaggcagaaatgtcaagaggtgttaagctggtggcagaactggaaagaatc
aggtcaatccttgaagaagaaactggtcgagtagctagtttcagtagctgggcagaagct
gctggagttgaacagaaggagttgcagcaccacttgcattttggttggtattgcagggat
gagcttctgaaaagcacacggtccttagtcttgtatttggcaagaaactacagggggctt
ggagtggcatttgaagacttaattcaggctgggaacatgggtgtgctacaaggtgctgta
agatttgacgacactaggggatacaaattctcaacttacgttcagtattggataagaaaa
tctttgtcaaaattggtggctcagcatgctagagggatccgaattcccttcactatatgc
aaagcaataaatcaaatacataaagctcgaaaagctctcagtaggagccatggaaaattt
ccaggtgataatgaaattgccaagtacacgggtctatccacggctaggattgcaatggct
agtaaatgtctgagagttgtgggttcaattgatcagaaagttggagactgcatcagtgca
aaagttttggaactcacaccagataaatcaattgtaagcccagaggaatctgtcatgagg
gaagacataatagacaacatgtatgctcttttagaaagcttggatccaaaagagcagcaa
gtaatatattttaggtttggtcttgaaaatcatcagcgcaaatccctcgaggagattggg
aggctttatggagtaagtaaagagtggattaggagaatagaacgaagagctctcacaaaa
ttgagaagcgcggattgttttcaagatttaactcattactctgtatag
DBGET
integrated database retrieval system