KEGG   Nicotiana attenuata (coyote tobacco): 109241479
Entry
109241479         CDS       T05870                                 
Name
(RefSeq) RNA polymerase sigma factor sigC
  KO
K03093  RNA polymerase sigma-I factor
Organism
nau  Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:nau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nau03021]
    109241479
Transcription machinery [BR:nau03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     109241479
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 HTH_31
Other DBs
NCBI-GeneID: 109241479
NCBI-ProteinID: XP_019263762
UniProt: A0A314L5M8
LinkDB
Position
Unknown
AA seq 555 aa
MGFRLHLKWGFSVQPPFSPNSASAWPSSHSFKGKEALYDPARSLKPFINGDCEPSHSDPF
RVRTCLSDPQLWTSDISVTTEIKTRIGRGSPSNIYGDIGSDKIGISPDGEKPLYLNTTRA
PHFSLLMKNIDLLENMFADSEMSRLENNILVQLEKLGALEFFHSRLSRTLHSTFPEVLDV
PRDLIEEIEKDDLVGNGINKVVVRSRKKQERKSRRNRASGIANDIITVHPHTKNIQEDMQ
QPKFYSGKRTHASRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEA
AGVEQKELQHHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAV
RFDDTRGYKFSTYVQYWIRKSLSKLVAQHARGIRIPFTICKAINQIHKARKALSRSHGKF
PGDNEIAKYTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPDKSIVSPEESVMR
EDIIDNMYALLESLDPKEQQVIYFRFGLENHQRKSLEEIGRLYGVSKEWIRRIERRALTK
LRSADCFQDLTHYSV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgggttttaggctgcacctcaaatggggtttctctgtccaacctcctttctcccccaac
tcagcatcagcatggccttcttcacattctttcaaaggaaaggaggctttatacgatcca
gctcggtctctcaaaccttttatcaacggggactgtgaaccttcacatagtgatcctttc
agagtgcggacttgtttatctgacccccaactgtggactagtgatatatcagttactaca
gaaataaagacacgaatcggcagaggatcccctagcaatatatatggagatattggcagt
gataagattgggatatcacctgacggggaaaaaccattatatttaaacacaaccagagcc
cctcattttagtttactaatgaaaaatattgatttgctggaaaacatgtttgctgattca
gagatgtcaagattagaaaacaatattctggtgcaactagaaaagcttggagctttagaa
ttctttcatagtcgtctctcaagaacacttcattctacttttcctgaagtgcttgacgtg
ccaagggatcttattgaagaaattgaaaaagatgaccttgttggaaatggaataaataag
gtagtcgtacgttctagaaaaaagcaagagcggaagtcaagaagaaacagagcatccgga
attgctaatgacattattacagtgcatccacataccaaaaacatccaggaggatatgcaa
cagccaaagttttattctgggaaaagaacacatgcttctagaaataaaagacagaagatt
gctaagaatgaggcagaaatgtcaagaggtgttaagctggtggcagaactggaaagaatc
aggtcaatccttgaagaagaaactggtcgagtagctagtttcagtagctgggcagaagct
gctggagttgaacagaaggagttgcagcaccacttgcattttggttggtattgcagggat
gagcttctgaaaagcacacggtccttagtcttgtatttggcaagaaactacagggggctt
ggagtggcatttgaagacttaattcaggctgggaacatgggtgtgctacaaggtgctgta
agatttgacgacactaggggatacaaattctcaacttacgttcagtattggataagaaaa
tctttgtcaaaattggtggctcagcatgctagagggatccgaattcccttcactatatgc
aaagcaataaatcaaatacataaagctcgaaaagctctcagtaggagccatggaaaattt
ccaggtgataatgaaattgccaagtacacgggtctatccacggctaggattgcaatggct
agtaaatgtctgagagttgtgggttcaattgatcagaaagttggagactgcatcagtgca
aaagttttggaactcacaccagataaatcaattgtaagcccagaggaatctgtcatgagg
gaagacataatagacaacatgtatgctcttttagaaagcttggatccaaaagagcagcaa
gtaatatattttaggtttggtcttgaaaatcatcagcgcaaatccctcgaggagattggg
aggctttatggagtaagtaaagagtggattaggagaatagaacgaagagctctcacaaaa
ttgagaagcgcggattgttttcaagatttaactcattactctgtatag

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