Nicotiana attenuata (coyote tobacco): 109241837
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Entry
109241837 CDS
T05870
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109241837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109241837
Membrane trafficking [BR:
nau04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
109241837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_WDHD1_1st
WD40
Beta-prop_HPS5
WD40_CDC20-Fz
zf_RING_Vps8
WD40_Prp19
WDR55
zf-RING_2
Beta-prop_EML_2
zf_RING_Vps8_fungal
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_WDR11_2nd
Beta-prop_TEP1_2nd
Beta-prop_IP5PC_F
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
109241837
NCBI-ProteinID:
XP_019264199
UniProt:
A0A314L4T2
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MNSIVMSQLPSENGIDGDDEREEEDSEEDSGEEEEKEEEEEEEDEPRLKYQRMGGSVPSL
LSTDVATCIAVAERMIALGTHAGAVHILDFLGNQIKEFAAHTAAVNDLCFDTEGEYVGSC
SDDGSVVINSLFTDERMKFDYHRPMKAIALDPDYARKSSRRFVTGGLAGHLYLNVKKWLG
YRDQVLHSGEGPIHAVKWRSSLIAWANDTGVKVYDAANDQRITFIERPRGIPRPELLLPH
IVWQDDTLLVIGWGNSVKIALIRTTQSKGVNGTYKHIPMSSLNQVDIVASFQTSYFISGI
APFGDSLVILAYIPGEEDGEKDFSSTIPSRQGNAQRPEVRVVTWNNDELATDALPVHGFE
HYKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHINWLLQHGW
HEKALEAVEANQGQSELLDEVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHF
AHLRQLPVLVPYIPTENPRLRDTAYEVALVALATNPSFHKDLLSTVKSWPPRIYSTVPVI
SAIEPQINTSSMTDPLKEALAELFVIDGQHDKAFALYADLMKPDLFDFIEKHNLHDAVRE
KVGQLMMIDCKRAVLLLIQQRDLISPSEVVSQLIAAKDKCDYRYFLHLYLHSLFEANLHA
GKDYHDMQVELYADYDPKMMLIFLRSSQHYTLEKAYEICVKKDLLKEQVFILGRMGNAKQ
ALSVIINRLGDIEEAIEFVSMQQDDELWEELIQQSFHKPEMVGVLLEHTVGNLDPLYIVN
MLPNGLEIPRLRDRLVKIVTDYRTETSLRHGCNDILKADCVNLLVKYYKEAKRAVCLSDE
VDEASSHRGEKRAPHLGERVMSMKSMEVKSKTRGGGRCCICFDPFSIQSVSIIAFFCCHA
YHTTCLMESTISIGGKKEAGAAAQGTVSYDEYDNGIHDDDEDEDASGAPRMRCILCTTAA
G
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtatcgtgatgtctcaactgccatcggagaatggaatcgacggcgacgatgag
agagaagaagaagattctgaagaggattctggagaagaagaagaaaaagaagaagaagaa
gaggaggaggatgagccgaggttgaagtatcagagaatgggcggtagtgtgccgtcgcta
ctatcaactgatgttgccacgtgtattgccgtcgctgaacgaatgatcgcccttggtaca
cacgctggagctgttcacattctagatttcctcggtaaccagattaaggagtttgctgct
cacactgctgctgtcaatgacctttgctttgacacagaaggggaatacgtcggtagctgc
tctgatgatggctctgttgtaataaatagtctttttactgatgagagaatgaaatttgat
tatcaccgaccgatgaaggccattgctctagaccctgattatgcaagaaaatcttccaga
agatttgttactggtggtttggcaggtcatttgtatttaaatgttaagaagtggctaggc
tatcgtgaccaggttttgcactctggtgagggtccaattcatgcggtgaagtggagaagt
agcctcatagcctgggcaaatgatacaggagttaaagtctatgatgctgccaatgatcag
cgtattacatttattgaaagacctcgtgggattcctcgacctgaactgctgctccctcat
atagtctggcaggacgacactcttttggtcattggttggggaaattctgtgaaaatcgca
ttgataagaacaactcaaagcaaaggcgtgaatgggacgtataagcatatacctatgtct
agtctgaatcaggtggatatagtggcatcttttcaaaccagctatttcatttcaggaatt
gctccttttggtgattctttggttattctagcttatattccgggtgaagaagatggagag
aaggacttcagcagcactattccctccagacagggaaatgctcaaagaccagaagtgcga
gttgtgacatggaataatgatgagctcgcgacggacgctcttcctgttcacggctttgag
cattacaaggccaaagactattcgcttgctcatgctccattttctggtagcagctatgca
ggaggtcagtgggctgctggtgatgaacccttgtactatattgtgtccccaaaggatgtt
gttattgcaaaaccaagggatgcagaggatcacattaattggcttctccagcatggatgg
catgagaaagctttagaagctgttgaagccaatcagggccagagtgaactacttgatgag
gttggttctagataccttgatcatttgattgtcgaaagaaaatatgctgaagcggcatct
ttgtgtccaaagttgttgcgaggatcagcttccgcatgggaaagatgggttttccacttt
gcacatctccggcagcttccagttttggttccatatatcccaactgaaaacccaagatta
cgcgatacggcttatgaggtagctcttgttgctttggcaacaaatccatctttccacaag
gatctcttatcaactgtcaaatcttggccacctcgcatttattcgacagtgcctgttatc
tccgctattgaacctcagattaatacctcatctatgactgatccactcaaagaggcgcta
gcagagctatttgtaattgatggacaacacgataaagcttttgctctttatgctgatctt
atgaaaccggatctatttgacttcatcgaaaagcataatttgcatgatgctgttcgtgaa
aaggtaggccaacttatgatgattgactgcaagcgtgcagtactgctgttaatccagcaa
cgtgacttaatatcaccatctgaagtggtatcacagcttattgctgcaaaggataagtgt
gattaccgatactttttgcatctctatcttcattcactatttgaagcaaatctccatgct
ggaaaggattaccatgatatgcaggttgagctgtatgctgactatgatcctaagatgatg
cttatctttctaagaagcagccagcattatacattggagaaggcttatgagatctgtgtg
aagaaagatttactgaaagagcaagttttcatccttggaagaatggggaacgcaaagcaa
gccctttctgttatcattaataggttaggagatatagaagaggccatagaattcgtaagc
atgcaacaagatgatgaactctgggaagaactgatacagcaaagttttcataagcctgaa
atggttggtgtactgttagagcatactgtaggaaatcttgatcccctttacattgtcaat
atgttgccaaatgggctggagatacctcgtctgagggatcgtctggtcaagattgtgacc
gactacaggacagagacttctcttagacatgggtgcaatgatatactcaaggctgattgc
gtgaacttgttagttaaatattacaaagaagcgaaacgtgctgtttgcttgagtgatgaa
gtagatgaagcatcttcccataggggtgagaagagggctccacatctgggagagagagta
atgagcatgaaatccatggaggttaagtctaaaaccaggggaggtggaaggtgttgcata
tgtttcgatccattttctatacagagtgtgtcaatcattgccttcttttgttgtcatgcc
tatcatacaacatgtcttatggagtccaccatttccattggtggcaaaaaagaggcagga
gctgctgcccagggaactgtctcatatgatgaatatgataatggtattcacgatgatgat
gaggacgaggacgcctcaggtgccccgcggatgcgttgtattttatgtaccacagctgca
ggttaa
DBGET
integrated database retrieval system
