KEGG   Nicotiana attenuata (coyote tobacco): 109242544
Entry
109242544         CDS       T05870                                 
Name
(RefSeq) protein SEH1
  KO
K14299  nucleoporin SEH1
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109242544
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nau03019]
    109242544
   04131 Membrane trafficking [BR:nau04131]
    109242544
Messenger RNA biogenesis [BR:nau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     109242544
Membrane trafficking [BR:nau04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    109242544
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_CDC20-Fz Beta-prop_WDR5 WD40_WDHD1_1st WD40_Prp19 ANAPC4_WD40 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_Aladin WD40_Gbeta WDR55 Beta-prop_EIPR1 Beta-prop_WDR75_2nd Beta-prop_HPS5 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 109242544
NCBI-ProteinID: XP_019264936
UniProt: A0A314L3G0
LinkDB
Position
Unknown
AA seq 325 aa
MDKPIIHLDKGTTCTAWNYSGQRLAAGSTDGNLSIFDSTDPASSVFSCSSKFKVHESSIV
KIIWAPPEYGDAVVCICADGSLLLWEEVVEDSELLQWKLCKCFDRISSQVLDVQFGVSKT
SLKLVAAYSDGQVKVFELLDPFELKNWQLQAEFQNVIESVSKFGNVSCQSASIAWNPLKG
EIQQSSFVLGFNSDMPQMNSSKVWEFDQDHQRWLPVAELALPADKGDPVSTVAWAPNIGR
PYELIAISTSKEIAIWHVGSNPDPGGRLSVEKVATLSTHDSEVWQMEWDMSGMTLATTGS
DDVVRLWQSDLNGVWHEQAVLEPTS
NT seq 978 nt   +upstreamnt  +downstreamnt
atggataaacccattatacatctggacaaaggcacaacatgtactgcttggaattattcg
ggtcagagattagcagctggttctactgacggcaatttgtccatctttgattctactgac
cctgcttcttctgtttttagttgctcttctaaatttaaggtgcatgaatccagcattgta
aaaattatttgggctccaccagaatatggagatgcagttgtttgcatttgtgctgatgga
agtttgttgttgtgggaggaggtggttgaagattcagagttgcttcaatggaagctgtgc
aaatgctttgacagaatctcatctcaagttctggatgttcagtttggagtctccaagaca
agtctgaaattggttgccgcatattcagatggccaggtaaaagtgtttgagctcctagat
ccatttgaattgaagaactggcagctacaggctgaatttcagaatgtcattgaatctgta
tctaaatttggaaacgtctcatgccaatctgcttctattgcttggaatcctttaaaagga
gaaattcagcaatcaagctttgttttgggttttaattccgacatgccacaaatgaactcc
tccaaggtttgggaattcgatcaggatcatcagagatggcttccagttgcggaattagct
ttacctgcagataaaggtgatccagtctctactgttgcatgggcgccgaatattggaagg
ccgtacgagttaatagcaatttctacttccaaggaaattgccatatggcatgttggatca
aatcctgaccccggtggaaggctctcggtggagaaggttgccacgctctctactcatgac
agcgaggtatggcagatggaatgggacatgagcgggatgacacttgctactactgggagt
gatgatgtagttcgcttgtggcagtccgacttgaatggggtttggcatgaacaagcggta
ttagagcccactagctag

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