Nicotiana attenuata (coyote tobacco): 109242670
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Entry
109242670 CDS
T05870
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109242670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109242670
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109242670
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
HECT type E3
109242670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
PDS5
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
109242670
NCBI-ProteinID:
XP_019265055
UniProt:
A0A314L2V6
LinkDB
All DBs
Position
Unknown
AA seq
1539 aa
AA seq
DB search
MGNRGQKRTETVDELPADKRACSSTEFRPSTSNSVVHTTMSSIHESRNGDVDTSSSSSGS
SEGGKDSAYGSCESDNSFRDYYRRQSLDNQGKFKGILSSLSKELSDESALLAALTELCEL
LSFSPDSSISNLMADSFSPVLVRLARHESNPDIMLLAIRAITYLCEIHPRSSAYLVRHDA
VPALCQRLMAIEYLDVAEQCLQALEKISHDQPIVCLQSGAIMAILSYIDFFSTSVQRKAL
STVVNICKKLPSECPSPLMEAVPILCNLLLYEDRQLVESVATCLIRIVEQVCRSSDMLDE
LCKHGLVQQATHLIELNGRTTVCQSVYAGLIGLLVKLAAGSIVAVRTLFELNISRISKDI
LSTYDFSHGGPSTLTVDGHYNQVDEVLKLLNELLPPISREQNIQLAADKEHFLINHPDLL
QKFGFDLFPVLIQVVNSGVNLYACYGCLSVINKLVYFSKSDMLKFLQNTNISSFLAGVFT
RKDPHVLILALQIVDKLLEKLSHVFLNSFVKEGVLFAVDAFLSPEKCSQFLYSDETCQGS
VPCAAVKCLCFASESSTGPEARTCKIEKETVQNLARHIRTNYFATDSMNSDLGITDVLQK
LKTLSSALTDLVHKASSSIAPLQEKEDFYPVLHQIMSELNGNDAISTFEFIESGVVKSLV
NYLSNGQYLGQKVDGDGSVDQLYIVEKRFALFGRLLLYNSVPPLEDSAFLALIKRLHSAL
SSVENFPVILSHASKLRNSYATVPYGRCTSYPCLKVHFVKGDGESSLGDYTESVVNVDPF
SPLETIEGYLWPKVSKRKSEKLKPPTLAIEEESSSRSSQDASTSQGKSPGPMELDTTPTN
AHETQEVKGNLQLSVEVETMDIEKTKSDSMDISNINAESLEKGKLCSSEDDSSTSLECTG
CSDDEDVAPKLIFYLEGQQLNQKLTLYQTVLQQQIKAGNDIITNSSMWSQVHRVTYRRFV
RHKPGCAQSGKHVVDSTPSEKPITWWQYTPYFSSMFGSEMVDLEKSSPTYDILFLLKSLE
GLNRFSFHLMSRMKIYAFAEGKTTDFGDIKFTNSDLPQNEFANTKLTEKLELQMRNPFSV
SVGGMPPWCGQLVNSCPFLFGFEARCKYFRLAAFGKPPIQPEPSSHNTAGGMSGRHQNNG
GLRRKKILVHRNRILDSATQMMDLHADQKVVIEVEYTDEVGTGLGPTLEFFTLVSHEFQK
IGLGMWRGDRMASGTMSVEEESGMLFSSFGLFPRPWSPLSHSSSGLEFSEVLKKFVLLGQ
IVAKALQDGRVLDLPLSKAFYKLVLGRELTVYDIQSFDPELGVALLEFQALIERKRHLES
EGKSSLDLELNFRNTKIDDLCLDYTLPGYPDYVFNSASDAKMVDMSNLEEYVSLIVDASL
NSGISRQIGAFKSGFDQVFPIKHLQVFTEDELERLLCGECGLWNSNELLDHIKFDHGYTA
SSPPVVNLLEIMREFDSKQQRAFLQFVTGAPRLPPGGLASLSPKLTIVRKTCSVWVDADL
PSVMTCANYLKLPPYSSKEKMKEKLLYAITEGQGSFYLS
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaccgggggcagaaaagaactgaaactgttgatgaactgcctgccgataagcga
gcctgtagctccacggaattcaggccaagtacctctaattcagtggttcatactacaatg
agttctatacacgaaagccgcaatggcgatgtggacacatcatcgtcaagttcagggtca
agtgaaggtggaaaggactctgcttatggatcttgtgaatctgataatagcttcagggac
tattacaggcggcaatcgctggacaatcagggcaaattcaaaggaattttgtcaagtttg
agcaaggaattatctgatgaatcagcgttgttggctgctcttaccgagctatgtgaattg
ttatctttttctcctgacagttcgatttcaaacttaatggcagattcattttctcccgtt
cttgtaagattggctagacatgagagcaatccggatataatgctattagctatcagggca
ataacttatttgtgtgaaattcatcctcgttcttccgcctacctagttagacatgatgca
gttcctgccctttgtcaaaggttaatggccattgagtacttggatgtggctgaacagtgt
ttgcaagcactggagaaaatttcgcatgaccagccgattgtgtgtttgcaatctggggct
atcatggccattttaagttatattgatttcttttctacaagtgtgcagagaaaggcactc
tcaactgtagtaaatatttgtaaaaagcttccctctgaatgtccgtcacctttgatggag
gcggttcccattttgtgtaatcttcttctatacgaggatagacagcttgttgagagtgta
gccacttgcttaattagaatagtggagcaagtatgtcgctcttccgatatgttggatgaa
ctctgtaaacacggtctggttcagcaagccacacatctcatagagttgaatggtcgaaca
acagtttgccaatcagtttatgctggtttaattgggttacttgtcaaactggctgctgga
tctattgtggccgtcaggactctctttgaacttaacatcagccgcatatcaaaggacatt
ttatccacttatgacttctcacatggggggccttccactctgacggttgatgggcattat
aatcaggtagacgaagttctcaagttgttaaacgaacttcttcctcccatatccagagag
cagaatatccaactagctgcagacaaagaacacttcctcatcaatcaccctgatcttctg
cagaaatttggctttgatttatttcctgtgttaatccaggtggtcaattctggtgtaaat
ttatatgcttgttacggctgtctatctgttatcaataagttagtttatttcagcaaatct
gacatgctcaaatttcttcaaaatactaatatttcaagcttcttagctggagtttttact
cgcaaagatcctcatgttctgatactagcccttcagattgttgataagcttctagagaag
ctctctcatgttttcttgaactcatttgtaaaggaaggtgttctctttgctgttgatgca
tttctttccccggaaaaatgttcgcagtttctatattccgatgaaacctgccaaggatca
gtaccatgtgctgcagtaaaatgtctttgttttgcttctgagtcttcaacaggacccgaa
gcaaggacctgcaagatagagaaagaaactgttcaaaatcttgctaggcatatcaggacc
aattactttgcaacagactcaatgaattctgatttaggaataaccgatgttctacagaag
ctgaagactctatcttctgcgttaactgatctggtccacaaagctagcagcagcattgct
cctcttcaagagaaagaagacttttaccctgttttgcatcaaattatgtcagagttaaac
ggaaatgatgccatttccacgtttgagttcattgaaagtggagttgtaaagtctctcgtg
aattacctttccaatggccaatacttgggacaaaaggtagatggtgatggttcagtagat
cagctgtatattgtagaaaagagatttgcgctgtttggtagattacttttgtataactca
gtccctcctctggaggactccgcctttcttgcactgataaagagattgcacagtgcactt
tcctctgtggagaacttcccagtcatcttgagtcatgcgtctaagctacgaaactcgtat
gctactgtcccatatgggcgttgtacttcatatccttgtctgaaggtccactttgtgaag
ggagatggggagtcgtcacttggagattatacagagagtgttgtgaatgtagatcctttt
tcgcctttggaaacaattgagggatacttgtggccaaaagtgagtaaaaggaaaagtgag
aagttgaaacctcccactctggctatagaggaagagtcatcctctcgttcatcacaagat
gcaagcacgtctcaaggcaaaagtccaggacccatggaattggacaccacacccaccaat
gcccatgaaacacaggaggtgaagggtaacttacaattatctgttgaagtggaaactatg
gatatagaaaaaacaaagagtgattcaatggatatttcaaatattaatgcagagtctttg
gagaaaggaaaactttgttcgtctgaagatgatagtagcacaagtttagagtgtactgga
tgttctgatgatgaagatgttgcaccaaaattgatattctacttggagggacagcagttg
aaccagaagttgaccctatatcaaactgtactccagcagcagattaaagcagggaatgac
atcattactaattcaagcatgtggagtcaagtacacagggtgacctacagaagatttgtg
agacataaaccaggatgtgctcagagtggcaaacacgtcgtagattctactccatctgag
aaacctataacatggtggcagtacaccccatatttctctagcatgtttggctccgaaatg
gttgatcttgagaaatcaagtccaacttatgacatcttatttcttctgaaaagcttggaa
ggcctgaacaggttcagttttcatctcatgtcccgtatgaaaatatacgcttttgcagaa
gggaagaccaccgattttggtgatataaagttcacaaattctgatctccctcagaatgag
tttgcaaacactaaattaacagagaaactagaactgcaaatgaggaatcctttttctgtt
tccgtaggtggcatgccaccttggtgtggacagttggttaattcatgcccctttttgttt
ggtttcgaggcaagatgcaagtatttccgcctggctgcatttggtaagccgccaatccag
cctgaaccgtcatctcataatacggcagggggtatgagcggtaggcatcaaaacaatggt
ggccttcgccggaaaaaaatcttagttcatcgaaatagaattttggattctgcaacacag
atgatggacctccatgccgatcagaaggttgtcattgaggtggaatatactgatgaggtc
ggtactggtcttggaccgaccttggaattttttaccttggtcagtcatgagttccagaag
attgggctagggatgtggagaggtgatcgcatggctagtggaaccatgagtgtagaggag
gaatctggaatgctcttctcttcttttggtctcttccctcgcccatggtcccctttatcc
cattcatcaagtggcctagagttctctgaagtgctgaaaaagtttgtgcttctggggcag
atagttgcaaaggctctccaagatggcagggttttggatcttcctttatccaaagcattt
tacaaacttgttcttgggagggaactcacggtatatgacatccagtcatttgaccccgaa
cttggtgtggctctcctagaatttcaggctcttattgaaagaaaaagacatctggaatct
gagggaaaatcatcgttagaccttgaacttaatttccggaatacgaaaattgatgatctt
tgccttgactatactcttcctggatatccagattatgtctttaattctgcatccgatgca
aaaatggttgacatgtctaatttagaggaatatgtttcactcattgtggatgcttcttta
aattctgggatatcaagacaaattggagcattcaagtcaggctttgatcaggttttcccc
atcaaacatctccaagtattcacagaggatgaattagagcgactgttgtgcggagagtgt
ggattatggaactccaatgagcttctggatcacatcaagtttgaccatgggtacactgct
agcagtcctccagttgtaaatttactcgaaattatgagggagtttgacagcaaacaacag
agagcattcctgcagtttgtgactggtgcacctagactgcccccagggggtctggcatct
ctaagcccaaagttaacaattgttcggaagacttgcagcgtttgggttgatgctgacctg
cctagtgtgatgacatgtgccaattatctgaagctaccaccttactcttcaaaagagaag
atgaaggaaaaactgttatatgccataactgaaggacagggctcattctacctttcgtag
DBGET
integrated database retrieval system
