Nicotiana attenuata (coyote tobacco): 109242977
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Entry
109242977 CDS
T05870
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109242977
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109242977
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
109242977
NCBI-ProteinID:
XP_019265419
UniProt:
A0A314L262
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MGTLSLSFLFLLSSLLLLPSIIASSSPLSNPQAVVDEVHRSVNASRRNLGYLSCGTGNPI
DDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGKIYVVTDSGDDDPVNPKPGTLRHAVI
QTEPLWIIFARDMVIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGIHIH
DCKQGGNAMVRSSPSHYGWRTVSDGDGVSIFGGSHVWVDHCSLSNCKDGLIDAIMGSTAI
TISNNFMTHHDKVMLLGHSDSYVQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWEMYAIGGSASPTINSQGNRFLAPDIRFSKEVTKHEDAPESEWKNWNWRTEGDLMLNG
AYFTQSGAGAKSSSYAKASSLSARPSSLVSNLVSGSGALNCRKGSRC
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgggcactctttctctttctttcctcttcctcttgtcttcccttctccttctcccgtcc
atcattgcctcctcctctcccctatctaatcctcaagctgttgtagatgaagtacatagg
agtgtaaatgcttcgagaaggaacttaggctatctatcttgtggtaccggaaatcctatt
gatgattgctggcgttgtgatcccaactgggagaagaaccgccaacgattagctgattgc
gccattggctttggcaaaaacgccgttggtggtagggatggtaaaatttacgtggtcacc
gactcaggtgacgacgatcctgtcaacccaaagccggggactctccgtcatgccgttatc
caaactgaaccgttgtggataatttttgctagggatatggttattcaattaaaagaagaa
cttattatgaactcattcaaaacaattgatggtagaggtgcgagtgtacatattgcgggc
ggtccatgtataacaatacagtacgtgacgaatattattatacatggaattcatatacat
gattgtaagcaaggaggtaatgctatggtgcggagctccccatcgcactacgggtggaga
acggtttccgacggtgatggagtgtcgatatttggtgggagccatgtttgggtggatcat
tgctctttgtctaactgcaaagacggcttgattgacgccattatggggtccacagctatt
acaatttctaataatttcatgactcaccatgataaagttatgctcttgggacacagtgat
tcttatgttcaagacaaaaatatgcaagttaccattgctttcaatcactttggcgaaggc
cttgtccaacgaatgccaagatgtagacatggttatttccatgtggtgaacaatgactac
acccattgggaaatgtatgcaattggtggaagtgctagtcccaccatcaatagccaaggg
aacagatttcttgcccctgatattaggtttagcaaagaggtaacgaaacacgaggatgct
ccagaaagtgaatggaaaaattggaattggaggactgaaggagatttaatgttaaatggt
gcatattttacacaatcaggagctggagctaaatcatcaagttatgctaaggcttcaagt
ttaagtgcaaggccttcttctttggtcagcaatttagtatctggttctggtgctctcaat
tgccgaaagggttctcgttgctga
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