Nicotiana attenuata (coyote tobacco): 109243085
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Entry
109243085 CDS
T05870
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109243085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109243085
03036 Chromosome and associated proteins [BR:
nau03036
]
109243085
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109243085
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109243085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
109243085
NCBI-ProteinID:
XP_019265525
UniProt:
A0A314L1Z1
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MEVDLGIHDQLIVSQSQCKRRKVSLDGVALDQIFGENEAALPTLQSTDYFTEPCLSELAI
RELMSPGYCSCVQDFTVGRFGYGFVKFFGETDVRGLDLDRIVTFSRHEVVVYEDENYKPP
VGEGLNKPAEVTLLLKIRSSKNCDVDSSREMVEKLRFRTERQGARFISFNPSNGEWKFSV
QHFSRFGLMDDDEEDMIMDDVSPEVQDPVDMNGGDVSYIDEETALVNTTDLSHSLPAHLG
LDPMKMKEMRMLMFPAEEEDVDDYHGGPSDRKPQFSKESSKSPFQHKYPRISPPLTRKTP
LALIEYKHGSFGSDSPGSILLTQQNKGVLLKTTKAEGFKLDLRQQTPVSGSHSHNVVDAG
LFMRRSFGVGWGPNGVLIHSGAPVGSKDSQSLSSIINLEKVAFDQVARDENKKFKEELVD
LFFDSPLLLHKEISHETKEFGEGPFTLKLQRVVCDRVMLSDVCRSYIGIVERQLEVPGLS
SASRVLLMHQAMIWELIKVLFSSRQLSGKSKSLEDEDEEDMIPDTRETVSDVDPEALPLI
RRAEFSYWLQESVCHRVQEEVSSLNDSSDLQHMFLLLTGRQLDAAVELAASRGDVRLACL
LSQAGGSMVNRSDVVRQLDLWRVNGLDFNFVETERIRVLELVAGNIHRALHDVDIDWKRF
LGLLMWYQLPPETELPVLFRTYQRLLNEGKAPSPVPVYIDEGPVEVSLNWHAVKHFDLGY
YLMLLHANQEIDFSALKTMFSAFASTNDPLDYHMIWHQRAVLEAIGAFSSNDLHVLDISF
ISQLLCLGQCHWAVYVALHMPHREDYPYLQAALIREILFQYCETWSSQDLQRQFIEDLGI
PSEWLNEALATYFNYYSEFPKALEHFLECGKWQKAHTIFMTSVAHSLFLSEEHSEIWRLA
ASMEDHKSEIEDWDLGAGIYVTFYLLRSSLQEDNDTMNQEGSLENKNSDCADFISRLNNS
LAVWTSRLPVEARVVYSKMAEEICNLLLSDSGGSSENEVQLSCYDTIFKAPIPEVTRAYH
LQDAVSLFTSYLSEVAS
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgatttagggattcatgaccaacttattgtttctcaatctcaatgtaaaaga
agaaaagtatctcttgacggcgtagctttagatcagattttcggcgagaatgaagctgct
ttacctaccttgcaatctactgattattttactgagccttgcttgagtgaattggctatt
agggagcttatgagcccagggtattgcagctgtgttcaagattttactgttgggaggttc
ggatatgggtttgtcaaattttttggggaaacagatgttagagggttggatttggatcga
atcgtgacgtttagcaggcatgaggtggttgtatatgaagatgaaaattacaagccccca
gttggcgagggacttaacaagcctgctgaagtaactttgctactgaaaatacgatcctcg
aaaaattgtgatgtggattcttctagagaaatggtggagaagttgagatttagaactgag
aggcaaggagcacgttttatctcgtttaatccatcaaatggagaatggaaattctccgtt
cagcatttcagcagatttggtttgatggatgatgatgaagaagatatgataatggatgat
gtctctccagaagttcaagacccagtggatatgaatggaggagacgtttcctacattgat
gaagaaaccgccttagtcaatacaactgatctttcacattctcttcctgctcatcttggg
ttagatcctatgaagatgaaagaaatgagaatgctgatgtttccagcagaagaggaggat
gtagatgattatcatggcgggccttctgatagaaaaccacaattcagcaaagaatcttcg
aaatcccctttccagcataaatacccgagaattagtcctcctttgacgcgcaagactcca
ttggctttgattgaatacaaacatggtagttttggctcagactcaccagggtccattttg
ctgacccaacaaaataagggtgtgcttctaaagacaacaaaggctgaaggtttcaagctg
gatctcaggcagcaaacacctgtaagtggaagccactctcataatgttgttgatgcagga
ttgttcatgcgtagatcatttggagttggctgggggcctaatggtgttcttatccattct
ggcgcgccagttggtagtaaagacagtcaaagtttgtcctcgataatcaatttggagaag
gtcgcatttgaccaagtagctagagatgaaaataaaaagtttaaggaggaacttgttgat
ttgttttttgattcacccctcctccttcacaaggaaattagccatgaaaccaaagagttt
ggggagggacccttcacgttaaagctacaaagagttgtgtgtgatcgtgtaatgctttca
gatgtatgtcggagttatattggtattgttgagaggcagttggaggttcctggattatct
tcagcatcccgtgttcttctgatgcaccaagcaatgatttgggaattaataaaagtgctt
ttctcatccagacaattgagtgggaaatcaaagtctctagaagatgaggatgaggaagac
atgatacctgatacgagagaaactgtttcagatgttgatccagaagcacttccattgata
aggagagcagaattcagctattggttgcaagagagtgtttgtcacagggtgcaggaagaa
gtaagctctttgaacgattcaagcgatctacaacatatgttcttacttctaactggtcgg
cagctggatgctgctgtggaactggctgcctctagaggagacgtgcgacttgcatgtctt
cttagccaagctggtggttcgatggttaatcgttctgatgttgttaggcagcttgatctt
tggagagtaaatggattggatttcaattttgttgagacagagaggattagggttcttgag
ttggttgctggcaacattcatagagctctgcatgatgtagacattgactggaaaaggttt
ctggggttgttgatgtggtatcagcttccaccagaaactgaattgcctgttttattccgt
acatatcagcggcttctcaatgaaggaaaagctccatctccagttccagtttatattgat
gaaggacctgtagaagtgtctttgaattggcatgcagtgaaacattttgaccttggttat
tatcttatgcttcttcatgccaatcaagaaattgatttcagtgctctaaagacaatgttc
agtgcctttgcttcaacaaatgatccccttgactaccacatgatctggcatcaacgagct
gttttagaagccattggtgccttcagttctaacgatcttcatgtcctagacattagtttc
atttctcagctgctgtgtcttggtcaatgtcattgggctgtctacgtggcgcttcacatg
cctcaccgtgaagattatccttatttgcaagccgctcttataagggaaatactctttcag
tactgtgaaacttggagttcacaggacttacagcggcagtttattgaggatctaggtatt
ccatcagaatggttgaacgaggctttggcaacatattttaattactactctgaattccca
aaagccctagaacactttttggaatgcggaaagtggcagaaagcgcacaccatttttatg
acttcagttgctcattctcttttcctatcagaagaacactctgaaatatggaggctagca
gcttccatggaggaccacaagtcagaaattgaagattgggatctgggagctggaatatat
gtaactttttatttgttgagaagttctttgcaggaggacaatgacactatgaatcaagag
ggctctctggaaaacaaaaacagtgattgtgcagacttcatcagtcgcttaaacaactct
ttggctgtttggactagcagattgcctgtcgaagcaagggtggtttattcgaagatggct
gaggagatatgcaatttgctgctttctgatagcggtggaagttcagaaaatgaggttcag
ctaagctgctatgataccatattcaaggcacccatacctgaagtcacccgtgcataccat
ttgcaggatgctgtgtctctttttacatcttacctttcggaggtggcgtcatag
DBGET
integrated database retrieval system
