Nicotiana attenuata (coyote tobacco): 109243194
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Entry
109243194 CDS
T05870
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nau03041
]
109243194
03036 Chromosome and associated proteins [BR:
nau03036
]
109243194
Spliceosome [BR:
nau03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109243194
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
109243194
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
Lsm_interact
PRP6_TPR
NRDE-2
RRM_RdRP1_2
xRRM
Motif
Other DBs
NCBI-GeneID:
109243194
NCBI-ProteinID:
XP_019265681
UniProt:
A0A1J6IRK0
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Position
1:13889037..13902167
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AA seq
851 aa
AA seq
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MAETVTLDSSTHPPQLPDENPTGNDDEDMLDAPKSTKSSDSDSDSEDDAQQNLQIQALQT
ELLNNPSNYDAHVQYIKALRKQGDIEKLRQAREAMNAIFPLSFEMWQEWTKDETSLSSGP
EALPAIEKLFERGVSDYLSVALWCDYLSFVQEHDQSVRTRSVGGISKARNLFERALVAAG
LHVAEGSRIWELYREFEQDLFLTIDETDADLREKQVQRIRNLFHRQLSVPLADISSTLHT
YKAWEAKQGADLDVDSSNLDGLSPHVASSYQKALDMMNARTHLENQISCEVAPESERLQN
FMAYLKFEQSLGDPARIQILYERAITEFPISSELWLDYTHYMDKTLKTSSLVRDIYKRAT
RNCPWIGDLWVRYLLSLERSRASEEELSAVFEKALQCTFSSFEEYLDVFLTRVDGLRRRL
SSLESGTESSDLDYIIIRETFQRASDYLSPHLKNTESLLRMYRYWSRLESTLGKDLAAAR
RVWESLLKISGSTLEAWQGYIAMEVEMGKISEARSLFKRCYSKRFPGSGSEDICNSWIRF
EREYGALEDFDFAVKKVTPRLEELQLFKLQEAKNIGVPADDRDNSSRKNVREKRKPVSNL
IEEQSPAKRHKDKTKNVKITSEDGKGQAKDSVKVNNTNPDVDASKPASGSKKENKDVSSG
KPKQYNDQCTAFVSNLNLKATYDDLRRFFSDVGGVVAIRILNDKFTGKSRGLAYVDFSDD
KHLAAAVAKNKQTLLGKRLSIAKSDPKGRKKGSDSHSASSRQGEGAEQTTESSKSGAKDS
AEGSKEGKGQPSSHQRATNIQLKGKNTFAVPRTVRPLGWVDKDKPKSEETDATEDEIPKS
NDEFRKMFIKS
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaccgtaaccctagattcctctacccatccacctcaacttcccgacgaaaat
cctaccggaaacgatgacgaagacatgctcgacgcccctaaatccactaaaagttctgat
tcggattccgactcagaggatgacgcacagcagaatctacaaattcaagctctacaaacg
gagctcttaaataacccttccaattacgatgctcatgttcaatacataaaagctttaagg
aagcaaggggatatagagaagcttagacaagcgagggaagccatgaatgctatttttcct
ttgagttttgagatgtggcaggagtggactaaagacgagacgtctctttcttcgggaccc
gaggctctccctgcaattgagaagctatttgagcgtggggtgtctgactatctttctgtt
gctttgtggtgtgactacttaagttttgttcaagagcatgaccaatcagtccgtacacgt
tccgtcggtggaatttcaaaggcaagaaatctctttgagcgtgcccttgtagctgctggt
ttgcatgttgctgaaggcagcaggatatgggaattatacagggaattcgaacaagatctt
ttcctcacaattgatgaaactgatgcggacttgagagagaagcaggtccagcggattagg
aatttattccatcgccagttgtctgtccctcttgctgatataagttcaactcttcacaca
tacaaggcttgggaagcaaaacagggagccgatcttgatgtagactccagtaacttggat
gggctttcgccacatgttgcctcttcatatcagaaggccctcgacatgatgaatgccagg
actcatcttgagaatcaaatatcttgtgaagttgcacctgaatcggaaaggcttcaaaac
tttatggcttacttaaaatttgagcaatcgttgggggatccagcgaggatacagatcttg
tatgagcgtgccataactgaatttcctatatctagtgaactctggcttgattatactcac
tacatggataaaaccttgaagacctccagtcttgttcgggacatttacaaaagggcgaca
aggaactgtccctggattggagacctgtgggtgcgatacttgctgtctcttgaacgcagt
cgtgcttctgaggaagagctatctgctgttttcgagaaggccctacagtgcactttctca
agctttgaagagtatcttgatgtatttctcacaagagttgatggcttaaggcggaggttg
tcttcgttggaatctgggactgaaagcagcgacttagattatataattatacgggaaact
tttcagcgtgcttcagattatttgtctccacatctgaagaatacagaaagtttattgcgg
atgtatagatattggagccgcttagaatcaactctggggaaagatctagctgcagctcgt
cgtgtctgggagagcctgcttaagatcagcggatctacgctagaggcgtggcaaggatac
atagctatggaagttgagatgggtaaaattagtgaagctcgatccctctttaagagatgc
tacagtaaacgattccctgggagtggctcggaggacatatgcaattcatggattcgcttc
gagagagagtatggtgcacttgaagactttgactttgccgttaaaaaggtcactcctcgc
cttgaagaactgcagttattcaagttacaagaggctaagaacattggtgtgccagcagat
gatagagacaattcctcgaggaaaaatgtgcgtgaaaagaggaagccagtatcaaattta
attgaagaacaatctcctgctaaacgtcacaaagataaaactaagaatgttaagatcact
tctgaagatggtaaaggccaagctaaagactcagtcaaggtaaataatacaaatccagat
gtggatgccagcaaaccagcgagtggaagcaaaaaagaaaacaaagatgtttcttccgga
aaaccaaagcagtataatgaccagtgtactgcatttgtatctaatcttaacctcaaggca
acgtatgacgacctacgcagattctttagtgatgttggaggagtggttgctatacgaata
ttgaatgacaagttcactggaaagtcaaggggattggcttatgtggatttctcggatgac
aaacacctggctgcagccgtggcaaaaaacaagcagaccttgcttgggaagagattgagc
attgctaagtcagatcccaaaggcagaaaaaaaggaagcgattctcacagcgcgtcttca
agacaaggtgaaggtgctgagcaaactactgagagttcaaaatcaggtgccaaggattct
gctgaaggttccaaggagggcaaggggcaaccttctagtcatcagcgggcaactaatatc
cagctcaaaggtaaaaatacgtttgcggtgcccagaactgtcaggcctcttggttgggtt
gacaaagataaacccaaatcagaagaaactgatgctacggaagatgaaattcctaaatcc
aatgatgaatttcggaaaatgttcatcaaatcttga
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