Nicotiana attenuata (coyote tobacco): 109243367
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Entry
109243367 CDS
T05870
Name
(RefSeq) multisubstrate pseudouridine synthase 7 isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nau03016
]
109243367
Enzymes [BR:
nau01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
109243367
Transfer RNA biogenesis [BR:
nau03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109243367
Prokaryotic type
109243367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
109243367
NCBI-ProteinID:
XP_019265835
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MLKTLCSKLRSHQQLLTKTLQQVLGHPKILKPYNSFFDQSLLPVTMMKTMDESDVGISCY
ISKLPGFRGILKQRYSDFIVNEVDLDGNVVHLTSLEAPAEVCSEDKDVNISDQLNKSYAT
EIESFRSLAGNSDADKLKGLIDKLNSGVDVSDESVVLSPSSDKLHRTAIHNFFKERLKFL
VTDAVDGPEDSSKCVRVRLNKGGNNGRGRFSRKRKDRNDKPYDSRGSDSWPEHLGKFLRF
HLFKENKDTQEALNVIAKMLGVQPRSFGFAGTKDKRAVTTQRVTVFKQRASRVAALNERL
IGIKVGDFCHVKEGLLLGQLYGNRFTITLRGVSADSEDIIKASAVALGEHGFINYFGLQR
FGSSSVPTHLIGAALLRGEWKAAVSLILDPREGEKNAISTVREYYKESGDIDGTLRQLPR
HLVAERAILQCLKKSPGNCLQALKGIPRTLRMMYVHSYQSYLWNHAASMRVQKHGFDQVV
LGDLVYSKEQPKEKETFVAECEDVNGNDMDDYSNLDETSETDLPEEKNISVKAINEEDLI
SGTYTIEDVLLPLPGSRVIYPSNDIGEVYCDLAQKDGISLTETAHKIKEFSITNMTGAYR
RVFQKPKDFEWELLSYTDGTIPLAQTDFDAIAKSVKKSKVREEKSTNGSEELAADYGTSS
AISEGGDMLPGKGREEKINSETMQSEKSQSGGNAQESQMALKLSFTLPASCYATMAVREL
LKTSTSVAFHKSLNE
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaaccctttgttccaaactccggagtcatcagcagctactaacaaaaaccctg
caacaagttcttggtcaccctaaaattctaaaaccttacaacagcttttttgatcagagt
cttttgcctgttaccatgatgaaaacaatggatgaatccgatgtgggcatctcctgctac
atttccaagctccctggctttcgtggcatactcaaacaaaggtactccgatttcattgta
aatgaagtggacttagatggaaatgttgttcatttgacttcattggaggctccagcggag
gtgtgttcagaggacaaggacgtaaatatatctgatcaactgaacaaaagttatgcgact
gagatagaatctttcagatctctcgctggcaattctgatgctgacaagcttaagggtctt
attgataaacttaattctggagtcgatgtcagtgatgaatccgtcgtcctttcaccaagt
tcagataaattgcatcgtactgcaattcataattttttcaaggaaaggttaaaattcctt
gtaacagatgctgttgatggaccagaggactcatcaaagtgtgttcgtgtgagattgaat
aagggagggaataatggaaggggtagattctctaggaaaaggaaagaccgaaatgataaa
ccttatgacagtagaggttcagacagttggccagaacatcttggcaagttccttaggttt
catcttttcaaggagaacaaggatacacaggaagctttaaacgttatagcaaagatgctc
ggcgttcagcctaggtcctttggatttgctggtactaaagacaagcgtgctgtaacaacc
cagagggttactgttttcaagcaacgagcaagtagagtagcagctctcaacgaaagattg
attggaatcaaagttggtgacttttgccatgttaaagaagggcttctgcttgggcagctt
tatgggaaccgatttactataacacttcggggagtgtcagctgattctgaggatataatt
aaagcatcagcagttgccctaggagagcatggatttataaactattttggtttacagcgg
tttggcagcagttctgtgccaacccatctaattggagctgcattattgcgtggagagtgg
aaagctgctgtcagcttgattcttgatccaagagaaggggagaagaatgccatcagtaca
gtaagggagtattacaaggaaagtggtgacattgatgggactctaaggcagttacctcga
catctggttgctgaaagggcgattttgcagtgcctgaaaaaatctcctggaaactgtcta
caagctctgaaggggatacccaggactctccgaatgatgtatgtacatagctatcaaagt
tatctttggaaccatgcagcaagcatgagagtgcaaaagcatgggtttgaccaagttgtg
ttgggagatctggtttattcaaaggaacaacctaaagagaaagaaacttttgttgctgaa
tgtgaagacgtgaatggcaacgacatggatgattatagtaatctggatgagacctcagag
actgatcttcctgaagaaaaaaatatatcagtcaaggctataaatgaagaagaccttata
tccggtacatataccatcgaagatgtacttctacctttgcccgggtctagagtgatttat
ccatcaaatgacattggggaagtttactgtgacttggcacagaaggatggtatcagcttg
acagagactgcgcataagatcaaggaattctccataactaatatgaccggagcttacaga
cgtgtgtttcaaaagccgaaggattttgaatgggaattgcttagttacactgatggaact
atacctctagcacagacagattttgatgccattgccaagtcagtaaagaaaagcaaggtc
agagaggagaagtcgaccaatggaagcgaggaacttgctgctgactatggtacatcttca
gcaatatctgaaggtggtgacatgcttccgggaaaaggtcgtgaggaaaagattaacagt
gaaacgatgcaatcagagaaatctcagagtggcggtaatgctcaagagagccagatggct
ctcaagctgagctttacactaccagcttcttgctatgcaactatggctgtgagggagctg
ctgaaaacatccacttctgttgcatttcacaagtctctaaatgagtaa
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