Nicotiana attenuata (coyote tobacco): 109243718
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Entry
109243718 CDS
T05870
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109243718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109243718
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109243718
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
109243718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
zf-RING_4
PHD_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
109243718
NCBI-ProteinID:
XP_019266537
UniProt:
A0A1J6J8A0
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All DBs
Position
1:1805221..1810446
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AA seq
330 aa
AA seq
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MELDSIECISSSDGIIDEDEIPLHHPHIIHSQFPSSKSPLNINNNSSNNNSDGISIHSTT
SVHELLECPVCTNSMYPPIHQCHNGHTICSTCKARAHNRCPTCRQELGDIRCLALEKVAE
SLELPCKYGSVGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSVVGDIPYLVAHLRDDH
KVDMHSGCTFNHRYVKSNPREVENATWMLTVFNCFGQCFCLHFEAFQLGTAPVYMAFLRF
MGDEIEARNYSYSLEVGGNGRKLTWEGTPRSIRDSHRKVRDSHDGLVIQRNMALFFSGGE
RKELKLRVTGRIWKEQQNPDGGACMPNLCT
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggagttggatagtattgaatgtatatcatcttcagatggtataatagatgaagatgag
atccctttacatcatccacatataattcattctcaattcccatcttcaaaatcacccctt
aatatcaacaacaatagcagcaataataatagtgatggcatttcaattcattctacaacc
agtgtacatgagcttcttgaatgtcctgtttgtaccaattctatgtaccctccaattcat
cagtgtcacaatggacacacaatttgttcaacatgtaaagccagggcacacaaccgatgt
cccacctgtcgacaagagcttggagatatcagatgcttagcactggaaaaagtggctgaa
tcgcttgaactcccttgcaaatatggttctgttgggtgtcctgagatatttccttattac
agtaagctaaaacatgaagcaatatgcaactttagaccatacaactgcccttatgctggg
tctgagtgctcagttgtcggtgatattccttacttggttgctcatttgagggatgatcac
aaggtagacatgcattcagggtgcacttttaaccaccgctatgtcaaatctaatcctcga
gaagttgaaaatgcgacgtggatgttaacagttttcaattgttttggtcaatgcttctgt
ctccattttgaagcctttcagctcggaacagctcctgtttacatggcatttcttcgtttt
atgggagatgagatagaggctcgaaactatagctacagcttggaagttgggggtaatgga
agaaaacttacatgggaaggtacgccccgaagcataagagacagtcaccggaaagttagg
gatagccacgatggactcgttatacaacgtaacatggcccttttcttttctggcggggag
agaaaagagcttaaactacgagtaactggaagaatatggaaagaacagcagaatcctgat
ggaggagcatgcatgccgaatctctgtacttaa
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