KEGG   Nicotiana attenuata (coyote tobacco): 109243933
Entry
109243933         CDS       T05870                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
nau  Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:nau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nau03400]
    109243933
DNA repair and recombination proteins [BR:nau03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    109243933
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 DEAD Prok-RING_4 zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_5 ResIII zf-RING_4 zf-ANAPC11 GIP1_N UBA_Rad5 zf-Di19
Other DBs
NCBI-GeneID: 109243933
NCBI-ProteinID: XP_019266491
UniProt: A0A314L094
LinkDB
Position
Unknown
AA seq 1017 aa
MGNKIAEELVSTVRSIVGDEYTEMDIIRALHMAKNDPTAAINIIFDTPSFKKLEIVNVVS
NSSSKNTGEIQKIEPSTVSSNEGLNINKSRIESECDRGSEWWYVGCGEVGGMSTCKGRIL
KAGEEVEFTYPVEKKNLSSASPAGKFGRGRQAAAACSEIVRFSTKACGEIGRIPNEWARC
ILPLVRDKKIRIEGCCKSAPNILAIMDSVLLSIRVYINSSMFRKSNQTSLKARSADDTVV
HPLPTLFHLLGLTPFKKAEFTPADLYTRKRPLSEQDSSSGRASVLHANLSKSSSSADGDK
VENDETISDTDLDYIVGSADNSEIQEMEPPSTLQCDLRPYQKQALHWMTQLERGRSTDEA
ATTLHPCWDAYRLKDERELVVYLNAFSGDATTEFPSTLEMARGGILADSMGLGKTIMTIA
LLLSHSERGGSSGSQPTSQLSGENGEASNILGQSPTFAKKSAKFSSLDKLLKHKPTLISG
GNLIICPMTLLGQWKAEIEAHAQPGALSLYVYYGQTRSKDTKVLARSDVVLTTYGVLASE
FSTENAEDSGGLYSIRWFRVVLDEAHTIKSSKSQISNAAAALIADRRWCLTGTPIQNNLE
DIYSLLRFLRVEPWGSWAWWNKLVQKPFEEGDERGLKLVQQILRSIMLRRTKSSTDREGR
PILVLPPADIQVTYCELTEVERDFYDALYKRSKVKFDQFVEQGRVLHNYASILELLLRLR
QCCDHPFLVMSRGDTQEFSDLNKLAKRFLKGGKETGEGKDVPSRAYIQEVVEELRKGEQG
ECPICLEAFEDAVLTPCAHRLCRECLLASWRSSTSGLCPVCRNTVSKQELITAPTDSRFQ
IDVEKNWVESSKVSALLGELERLRSIGSKSIVFSQWTAFLDLLQIPLSRSNIPFVRLDGT
LNQQQREKVIKKFSEEDGILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRV
HRIGQTQQVMIKRFIVKGSVEERMEAVQARKQRMISGALTDQEVRTARIEELKMLFA
NT seq 3054 nt   +upstreamnt  +downstreamnt
atggggaataagatcgcagaggagctcgtttcaacggtacggtccattgttggcgacgaa
tatacagagatggacataattagagcacttcacatggccaaaaacgaccccacagctgca
attaatatcatttttgacactccaagtttcaagaaactcgaaattgtaaatgtagtttca
aattcaagtagtaaaaatactggtgagatccaaaaaattgagcctagtacagtttcttca
aatgagggattgaatattaataagagtagaattgagagtgagtgtgatagggggagtgag
tggtggtatgtggggtgtggtgaggtaggcggtatgtcaacatgtaaaggaaggatattg
aaggctggtgaggaagttgaatttacgtaccctgtggagaagaagaatttgagttcagct
tcaccagctgggaagtttggacgagggcgtcaagcggctgctgcttgttctgaaattgta
aggttttctaccaaggcttgtggagagattgggcgtattccaaatgaatgggctcgatgt
attctgccgttggtgagggataagaagattagaattgaagggtgttgcaaatcggctcct
aatatattggcgattatggactctgttcttttgtccatcagagtgtatattaatagctcc
atgttccgtaaaagcaatcagacatcactaaaggctagatctgcagatgatacagttgtt
cacccccttccaactttgttccatttgctcggacttactccttttaagaaggcagaattc
actccagctgatttatacacgaggaagcggcctttgagcgaacaggacagctctagtggt
cgtgcctcagtattgcacgcgaacttatccaaaagctcttcatctgcagatggagataaa
gttgagaatgatgagacaatttctgatactgatcttgattatattgttggttcagctgat
aactcggagatacaggaaatggaaccaccaagtacactccagtgcgatctgcgaccctat
cagaagcaggcgcttcattggatgacacaactggagaggggaagaagcacggatgaagca
gcaacaactctgcatccatgttgggatgcttaccgtctgaaagacgagagggagcttgtt
gtttacttgaatgcattttcgggtgatgcgaccactgaattcccgagtacccttgaaatg
gctagaggaggaattttggcagattcaatggggttagggaagactataatgactatagct
ctcctcctcagtcattctgaaagaggtggatcatcagggagccaacctacaagccagctg
tccggtgaaaatggtgaagctagtaatattttaggtcaatctccaacttttgcaaagaaa
tcagcaaaattctctagtcttgataagctcctgaaacataagcccacacttatctctggt
ggcaatctgataatatgtccaatgacactactaggtcaatggaaggcagagattgaagcc
catgcacaacctggtgctctatctctttatgtttactatgggcagacaagatcaaaggat
acaaaagtgcttgctcgaagtgatgtcgtgctgacaacatatggagttttggcctccgaa
ttttctacagagaatgctgaggacagtggggggctttactctattagatggtttagagtg
gtgcttgatgaggcacatactatcaaatcttctaaaagccaaatttccaatgctgctgct
gctcttattgctgaccgtcggtggtgtcttactggtacccctatccagaacaatctggag
gatatttacagtcttcttagatttttgagggttgaaccatggggaagctgggcatggtgg
aacaagcttgttcagaaaccttttgaggagggagatgagagggggctaaagttggttcaa
caaattttaagatcgatcatgttgagaagaacaaagtctagtacagacagggaaggcaga
ccaattttagttctaccaccagcagatattcaagtgacatattgtgaactaacagaagta
gagcgcgacttctatgatgcattgtataaaagatccaaggtgaagtttgatcagtttgtt
gagcaaggacgagttctccacaactatgcttctatattggagttgcttttgcgacttcgt
caatgttgtgaccacccgtttcttgtaatgagtcgaggtgatacccaagaattctctgat
ctaaataagcttgctaaacgtttccttaagggtggtaaggagactggagaaggcaaagat
gttccttcacgtgcttatattcaggaggttgtggaagagttgcggaagggagaacaggga
gaatgtcctatttgtcttgaagcttttgaagatgcagtcttgactccatgtgctcatagg
ttatgtcgagagtgtctcttggcaagctggcgaagttctacctcgggcctttgtcctgtt
tgtagaaacactgtcagtaagcaggagcttataacagccccgacagatagccgctttcag
attgatgttgagaagaattgggtggagtcatcaaaagtatcagccttgttgggtgaacta
gaacgtcttcgttccattggctccaaaagcattgtttttagtcagtggactgccttctta
gatctattgcagattcctctttctcgtagtaatattccatttgtacgccttgatgggacg
ttaaaccagcaacaacgtgagaaagtaataaagaagttctcagaagaggatggcatattg
gtgttgctgatgtcattgaaggctggtggtgttgggataaacctgacggctgcatctaat
gcttttgtcatggatccgtggtggaatccagctgttgaggaacaagcggtcatgcgtgtt
catcgtattggacaaactcagcaagtaatgattaaacgattcattgtgaagggttcagtt
gaggaaagaatggaagcagtacaagctaggaagcaacggatgatttctggtgctttgacg
gaccaagaagttcggactgcaagaattgaggaacttaagatgctttttgcatag

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