Nicotiana attenuata (coyote tobacco): 109244005
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Entry
109244005 CDS
T05870
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109244005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109244005
03110 Chaperones and folding catalysts [BR:
nau03110
]
109244005
03029 Mitochondrial biogenesis [BR:
nau03029
]
109244005
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nau04147
]
109244005
Enzymes [BR:
nau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
109244005
Messenger RNA biogenesis [BR:
nau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
109244005
Chaperones and folding catalysts [BR:
nau03110
]
Heat shock proteins
HSP60 / Chaperonin
109244005
Mitochondrial biogenesis [BR:
nau03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
109244005
Exosome [BR:
nau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109244005
Exosomal proteins of other body fluids (saliva and urine)
109244005
Exosomal proteins of breast cancer cells
109244005
Exosomal proteins of colorectal cancer cells
109244005
Exosomal proteins of bladder cancer cells
109244005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
109244005
NCBI-ProteinID:
XP_019266577
UniProt:
A0A314KZX5
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MYRFAAKLASKASVARNSTYQVGSRLNWSRNYAAKDVKFGVEARGLMLQGVEQLADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFAEGCKSVAAGMNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIQDGKTLFNELEVVEGMKLDRGYISPYFITNEK
NQKCELDDPLILIHEKKISSINAIVKVLELALKKQRPLLIVSEDVESEILATLILNKLRA
GIKVCAIKAPGFGENRKANLQDLAALTGGQVITEELGLNLENVELDMLGKCKKVTISKDD
TVVLDGAGEKKAIEERCEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKVGGASELEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDNLPTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLEQDDPDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAA
SVSSLLTTTEAVVVELPKDETPSPPMPGGGMGY
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcagctaaacttgcttctaaagccagtgttgccagaaacagcacctac
caggtgggtagtaggttgaattggagcagaaattatgcagccaaggacgttaaatttgga
gttgaagctcggggcttgatgcttcagggtgttgagcagcttgctgatgcagttaaagtt
accatgggtccaaagggtcgtaatgtggtgattgaacaaagttggggtgcacctaaggta
acaaaagatggtgtgactgttgcaaaaagcatcgaattcaaggacaaaataaaaaatgtt
ggtgccagccttgtaaaacaggttgccaatgccactaatgatgttgctggtgatggtacc
acttgtgcaacagttctcacccgagcaatatttgctgaagggtgcaagtctgtcgcagct
ggtatgaatgcaatggaccttagacggggtatcacaatggctgtggatgctgttgtaaca
aacctgaaaagcagagcacggatgataagcacatcggaggagattgcccaggttgggaca
atctctgcaaatggagaaagagaaattggtgagctaattgcaaaggctatggagaaagta
ggcaaggaaggtgtcatcactatccaagacggaaagacattgtttaatgagttggaagtt
gttgaggggatgaagctggacaggggctacatatctccatactttatcacgaatgagaag
aatcagaaatgtgagctggatgacccacttattcttattcacgagaaaaaaatctcaagc
ataaatgctattgtgaaagtgttagaattggctttgaagaagcaaaggcccctcttaatt
gtgtccgaagatgtggagagtgaaatacttgctacacttattctgaacaagcttcgtgct
ggaatcaaggtttgcgccatcaaagctccaggatttggtgaaaacaggaaggctaatttg
caagatcttgctgctttaactggaggccaggtcataactgaagaacttggattgaatctt
gagaatgtggagttggacatgctgggaaaatgtaaaaaggtgactatctccaaggatgac
accgtcgttcttgatggtgctggtgagaagaaggccattgaggagagatgtgaacagatc
agatcagcaattgaactgagcacatctgattatgacaaggaaaaattgcaggaaagacta
gctaagctttcaggtggtgttgcagtattgaaggtcggaggagctagtgaacttgaggtt
ggtgagaagaaagacagagttacagatgctttgaatgccacaaaggctgctgtagaggaa
ggaattgttccaggtggtggtgttgcacttctttatgcatcaaaagaattggataacttg
ccaacagccaactttgaccagaagattggtgtccaaattattcagaatgctctgaagaca
ccagtacatacaattgcctctaatgccggggtggagggtgctgtagtggttggtaaactg
ttggagcaggatgaccctgatcttggatatgatgcggcaaaaggtgaatatgttgatatg
gtaaaatcagggatcatcgaccctttgaaagtaattaggactgctctagttgatgctgct
agtgtgtcatctctattgactacaaccgaagctgttgttgttgagcttcccaaggacgag
acgccatctccacctatgcctggtggtggtatgggctactaa
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