Nicotiana attenuata (coyote tobacco): 109244014
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Entry
109244014 CDS
T05870
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00100
Steroid biosynthesis
nau00909
Sesquiterpenoid and triterpenoid biosynthesis
nau01100
Metabolic pathways
nau01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
109244014
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
109244014
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nau01006
]
109244014
Enzymes [BR:
nau01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
109244014
Prenyltransferases [BR:
nau01006
]
Terpene biosynthesis
Squalene/phytoene synthase
109244014
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HEPN_SAV2148
PhoU_div
Motif
Other DBs
NCBI-GeneID:
109244014
NCBI-ProteinID:
XP_019266590
UniProt:
A0A1J6JES4
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Position
2:9387577..9397352
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AA seq
403 aa
AA seq
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MGIIGDIVRHPNEIYPLMKLLVTAKLAEKQIPSKPNWRFCYLMLRNISRSFSLVIQQLPL
ELRDAVCVFYLVLRALDTVEDDTSIATEVKVPILIAFHRHIYDHEWHFSCGTDAYKDLMD
QFHHVSTAFLELGRNYQQVIEDITMRMGEGMAKFVSKEIETIDDYEEYCHYVAGLAGLGL
SKLFHASGKEDLAPDSLPNAVGLFLQKTNIIRDYLEDINEVPKCRMYWPRQIWSKYVNKL
EDLKFEENSVKAVQCLNDMVTNALSHAEDCLVCLSTLRDPAIFRSCAIPQIMAIGTLTMC
YNNVEVFRGVVKMRRGLSAKVFDQTKTMEDVYGAFFHFSSILKSKVDNNDPNATNTLKRI
ESIMKTCSGTLTKRNKPNYIPTLIIVFLVVVAILLAYLSAKRP
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggggataataggagatattgtgagacatccaaatgagatatacccattgatgaagctg
ttggtaacagcaaaattagcagaaaaacaaattccttcaaagccaaactggagattttgc
tatctcatgctccgcaacatctctcgcagcttctctctcgtcattcaacagcttcccctt
gagcttcgagacgctgtatgtgtattctatttggttcttcgagcccttgacactgttgag
gatgataccagcatagccacagaggttaaagtacctattctgatagcttttcatcgacac
atatatgatcatgaatggcatttttcatgtggtacagatgcctacaaggatctcatggac
cagttccatcatgtttcgacggcttttttggaacttggaagaaattatcagcaggtgatt
gaagatattactatgaggatgggtgaaggaatggctaaattcgtaagcaaggagattgaa
acaattgacgattacgaggaatattgtcattatgtagctgggcttgcaggattaggcttg
tcaaaacttttccatgcctctggtaaagaagatttagctccagattctcttcccaatgct
gtgggcttatttcttcagaaaacaaatatcattagagattatttggaggacataaatgaa
gtacccaagtgtcgtatgtattggcctcgtcaaatttggagtaaatatgttaacaaactt
gaggacttgaagttcgaagagaactcggtcaaggcagtacaatgtctcaatgacatggtc
actaatgcattatcacatgcagaagactgtctggtttgcctatccacattacgtgatcca
gctatctttcgatcctgtgctataccacagatcatggctatcggaacattgacgatgtgc
tacaacaacgttgaagtcttcagaggtgttgtaaaaatgagacgaggtctcagtgccaag
gtttttgaccagaccaagacaatggaagacgtatatggtgcttttttccatttttcttct
atactgaaatccaaggttgacaataacgatccaaatgcaacaaatactttgaagcggatt
gaatcaatcatgaaaacttgctctggaaccttgactaaaaggaacaagcctaattacata
ccaactttgattattgtctttttggtcgtcgtggctattcttcttgcttacctgtctgca
aaaagaccctag
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