Nicotiana attenuata (coyote tobacco): 109244239
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Entry
109244239 CDS
T05870
Name
(RefSeq) E3 ubiquitin-protein ligase ATL31-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109244239
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109244239
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
109244239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
zf-Nse
Prok-RING_1
Baculo_RING
Prok-RING_4
zf-C3HC
RINGv
PHD_NSD
Tmpp129
zinc_ribbon_16
MerT
PHD
FANCL_C
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
109244239
NCBI-ProteinID:
XP_019266843
UniProt:
A0A1J6IMT4
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Position
2:complement(10447673..10449436)
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AA seq
409 aa
AA seq
DB search
MFSFKSQYGPVNIHLLILLFVLSCPMIPNAAAQPSDSSSGPDNRFRYPTVSPAMAVIIVV
LIAALFFIAFFSIYIRNRSAANGNTIRQTLSMRRRSAAAATRGLDNLVIETFPTFTYAEV
KDHHIGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLKSHVTCPVCRADLSTP
QPDEPPVQAAEVPNPDQVGTENLQQNNEVSIQVESDENCMLQQEETSTVIPKANRTLSFN
VPNRPLRSFSIKRPRMFNKFRSHSTGHALVVPGENLDRYTLRLPENVRKEVMSRALLNRT
KSCAITIPRYGSTRTGNRTGEGSNIGARSFRRIDRFDQEAKSDRWVFKIAPPFFTRGPSI
KSPKVRLDIEEGSTSRNVKMAVKMPSFKCLEPKGDEPGLLTDDSARPPV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctttaaaagtcaatatgggcccgtcaatattcatctcctgatcctcctgttc
gtattatcatgtccaatgattccaaatgcggcggcgcagccatcagattcttcttctgga
ccggacaatcggttccggtatccaactgtcagcccagcaatggccgttattatagtggtt
ctcatagctgcactgtttttcattgcatttttctcaatttacatccgcaaccgcagcgcc
gctaacggtaacaccatccgtcaaacactttccatgcgccgccgtagtgctgctgctgcc
acacgtggactcgataatttggtcatagagactttccccacttttacctacgccgaagta
aaggatcatcatatcggtaaaggagctttggaatgtgctgtgtgtttgaacgagtttgaa
gacgacgaaacgctgcgtttgatcccaaagtgtgatcacgttttccaccctgaatgtatc
gatgcttggctcaagtctcatgttacttgcccggtttgccgagctgaccttagtactcct
caacctgatgaaccgccggttcaagccgctgaggtaccaaaccctgatcaagtagggaca
gagaatttgcagcaaaataacgaggtttcaatacaagtagagagtgatgaaaattgtatg
ctacagcaagaggagacctctactgtaatcccgaaagctaatcgaactttaagtttcaac
gtgccgaaccggcctctgaggtctttttctatcaagaggccaaggatgtttaacaagttc
aggtcacattcaaccggccacgcgttagtggtaccgggggagaatttggaccggtacact
ctcagattaccggagaatgttagaaaagaggtgatgagccgggcactactgaaccggaca
aagagttgtgcaatcacaataccaagatatggtagcactagaacagggaacagaaccgga
gagggaagcaatattggtgcgaggtctttcaggagaattgaccgcttcgaccaggaagca
aagtcggaccggtgggttttcaagattgcaccaccgttctttactagaggtccttcgatt
aagtcaccaaaagtaaggcttgatattgaagagggctccacatcacgcaatgtgaaaatg
gcagtcaaaatgccgtcgttcaaatgcttagagccaaaaggtgatgaacccggtttgcta
acagatgactcggctcggcctccggtttaa
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