Nicotiana attenuata (coyote tobacco): 109244294
Help
Entry
109244294 CDS
T05870
Name
(RefSeq) germacrene C synthase-like
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
109244294
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
109244294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_synth
Terpene_syn_C_2
KH_N4BP1_2nd
VraX
Motif
Other DBs
NCBI-GeneID:
109244294
NCBI-ProteinID:
XP_019266903
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MSQAFPSYCIWKYSSCEPRIHNASYPSASFGNRANFQSTVWGSYRERERTLIMRPLALMD
PSASRPLADFHSTTWGHHFLNFQLQEISTQEKLELEELKEIVRKMLVETPDNTTQKLVLI
DTIQRLGIAYHFDNEIETSIQNIFDAIENNVDDNLNVVALRFRLVRQQGHYMSSDVFKKF
TNSDGIFMRTLVNDVEAFLNLYEAAHLRVHGEEILEEALIFTTTHLESMLPNLSNSLKAQ
VTQALSHPIRKAIPRLAARKYIDIYKGMESHNDLLLKFAKFDFNMLQKLHQREISELTSW
WKDLDLVNKFPYARNKLVEGYSWTLALYFEPRFSRARIMLLKVFKMLSICDDTYDAYATF
DELVLLTDAIQRWDISAMDSLPPYMRPFYQAMLDVFNEMEEVLAKEDKSDRIYYGKFEVK
KLARAYFKEAKWLNAGYIPTCEEYIENAIVSNTFMALGTLSLIGMEELITKDIFEWITSE
PSIVRASSTICRLMDDISDHEVQQQRGHVASIIECFMKEYGASKEEAYVKFRKEVRNSWK
DINKALLRPTEVPTFVLERVLNLARSMDTHFQDEEDGYTDSTSKSKDVITLLLVEPVNI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagcttttccatcatactgtatttggaaatacagtagttgtgaacccagaata
cataacgcgtcatatccttctgccagctttggtaacagggcaaattttcaatctaccgtt
tggggatcatatagagagcgagagagaacattaattatgaggccattagcattaatggat
ccttcagcttcacgtcctttggcggattttcattcaaccacttggggacaccatttcctc
aattttcaattgcaggaaattagtacccaagaaaaacttgaacttgaagaattaaaagaa
atagtgaggaaaatgttggtggaaactcctgataatactacacaaaaacttgtattgata
gatacaattcaacgactgggaatcgcatatcatttcgataatgagattgaaacatccatt
cagaacatcttcgatgcgattgagaataatgttgacgacaaccttaacgtcgttgctctt
cgtttccgacttgtgaggcaacaaggccattacatgtcttcagatgtgttcaagaaattc
actaacagcgacggaatattcatgagaacccttgttaatgatgtcgaagcattcttaaat
ctgtacgaagcagcacatctgagagtgcatggggaggagattcttgaagaagctctaatc
tttaccaccactcatctcgagtccatgttacccaacttgagcaactcacttaaggctcaa
gttactcaagccttaagccacccaattcgcaaagccataccaaggttggcagcaaggaaa
tacatagacatttataaaggcatggaatcgcacaatgatttgcttttgaaatttgccaaa
tttgattttaacatgctacaaaagctgcatcaaagagagattagcgagcttacaagctgg
tggaaagatttggaccttgtaaacaaattcccatacgcaagaaacaaattagtggagggt
tactcttggacattggcattgtactttgagcctcgatttagtcgtgcgagaataatgttg
ttaaaagtcttcaaaatgctctccatatgtgatgatacctatgatgcatatgcaaccttt
gatgaacttgtgcttctcaccgatgcgatacagagatgggacataagtgccatggattca
ttaccgccatatatgagaccattttaccaagccatgcttgacgtcttcaatgaaatggaa
gaagtattggccaaagaagataaatcagatcgcatctactatggaaaattcgaggtgaaa
aagctggcgagagcctattttaaagaggccaaatggttaaatgctggctacattccaaca
tgtgaggagtatatagaaaatgcgattgtaagcaatacctttatggcgcttggaacactt
tccttgattggtatggaggaacttataacaaaagacatttttgaatggatcacaagtgag
ccttcaattgttcgagcgtcatcaaccatctgtagattaatggacgatattagtgatcat
gaagttcagcaacaaagaggacatgtagcttcaattatagaatgctttatgaaagaatat
ggagcttcaaaggaagaggcctatgttaagtttcggaaggaagtgaggaattcgtggaaa
gacataaataaggcattactccgccccactgaagtaccaacatttgttctcgaacgagtt
ttaaatcttgcacgttcaatggatactcatttccaagatgaagaagatggatacacagat
tcgacttccaaaagcaaagacgttattaccttgttgcttgttgaacctgtcaatatatga
DBGET
integrated database retrieval system