Nicotiana attenuata (coyote tobacco): 109244295
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Entry
109244295 CDS
T05870
Name
(RefSeq) uncharacterized protein LOC109244295
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109244295
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
109244295
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
109244295
NCBI-ProteinID:
XP_019266904
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MGFKKQNRIVLWCFAIVFQFLLLVNGSKVQHSRNNLSKESRKLQQVSPPVTMTIINGYVV
IDNGILQLSLTNPTGAIVGIKYNGIDNLLEPLEETQRGYWDTVWNGRFDTLFASSFSVIA
QDDNKVEVSFTKTYNPLDAGSAPLNVDKRYIVLRGSSGFYSYGIIEHLKGWPDVMLDELR
IAFKLSKSLFHYMAISDDRQRIMPSEEDRASGQVLDFKEAVKLINPSNPKLKDEVDDKYQ
YSDEIKNIKVHGWISDTPHMGFWVISPSYEYCNGGPMKQDLTSHVGPTSMAVFFSSHYAA
PLLGVSLTNGEAWRKVFGPVFFYVNSDSGIDHTVLWEDAKRQMNEETTKWPYDFPASIDY
PHANERGSVSGQLVVHDGYINRDPFPAKNAYIGLANPGVVGSWQSETKGYQFWTQTDDSG
YFMISNVRPGIYGVYSWVPGIIGDYMFSSYISITPGNNIDLGQIVFEAPRNGPTLWEIGF
PDRTAAEFFIPDPLPGLQNYLYINTTVHKFRQYGLWNRYADLYPNGDLVYKIGVSDYRKD
WFFAHVTRRNLDNTYGPTTWQISFDLTNVDPNGIYYLRIALASASYGHLQVWINTPSKPR
PWFDTLQIGQSNAIARHGIHGLYMTFDIQIPGTILQIGENIIYLKQASANGPFNGLMYDY
IRLEGPPQ
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggggttcaaaaagcaaaacagaatagttttgtggtgttttgctattgttttccaattt
ttattgcttgtcaatggttcaaaggtgcaacattctaggaataatctatccaaagagagt
cgaaaactgcaacaagtttctcctccggtcacaatgacgatcataaatggctatgtggta
attgataatggcattctgcaactttctctaacaaatcccactggagcaattgttggaata
aaatataacgggatcgataatctcctagaacccttggaagaaactcagaggggatactgg
gatactgtgtggaacggtcgttttgacacgctatttgcgtcaagttttagtgtaatagca
caagatgataacaaagttgaagtttctttcacaaaaacatataatcctttggatgctggg
agtgctcctctaaatgttgacaaaaggtatatagtgctgcgtgggagttctggattttat
tcatatggaataattgaacacttgaaaggatggcctgatgttatgttggatgaacttaga
attgctttcaagctcagcaagtcactgttccattatatggcaatatcagacgataggcaa
aggataatgccatcagaagaggatcgcgcaagtggccaagtacttgattttaaagaagct
gttaaactcataaatccatccaaccctaaactcaaagatgaggtggatgacaagtaccaa
tactcggatgagattaaaaatattaaagtacatggatggataagtgatactccacatatg
ggattttgggtaatttccccaagttatgaatattgcaatggtggtcctatgaagcaagat
cttacctctcacgttggtccaacatctatggcagtatttttcagtagtcattatgcagca
ccactattgggagtttcactaacaaatggagaggcatggagaaaggtttttggccctgta
tttttctatgttaactcagattctggcattgatcataccgtactttgggaagatgccaaa
agacagatgaatgaagaaactacaaaatggccatatgattttccagcatcaatagactat
ccccatgcaaatgaaaggggctcagttagtggtcaattagtggtccatgacgggtacata
aacagagatccttttcctgcaaaaaatgcatatattggacttgctaatcctggagttgta
ggatcttggcaaagtgagaccaagggttatcaattttggactcaaactgatgattctggt
tatttcatgataagtaatgttagacctggaatttatggtgtatattcttgggttcctgga
attattggagattacatgttctcctcttatatatccattacaccaggaaataacatagat
ttaggtcaaatagtttttgaagctccaagaaatggtccaactctatgggaaattggcttc
cctgatagaacagctgctgaattctttatacctgatccattgcctggtcttcagaattat
ttgtacattaacactactgtacataagtttagacaatatggtttatggaatcgttacgcg
gatttgtatcctaatggagatttagtatacaaaattggcgttagtgattatcgaaaagat
tggttctttgcccatgtaaccaggagaaatttggacaatacttatggaccaacaacatgg
caaatttcatttgatctcacaaatgtggatcctaatggcatttactatcttcgtatagct
ttggcttctgcatcctatggccatttgcaagtgtggataaacactccctcaaaaccaagg
ccatggtttgatactttacaaattgggcaaagtaatgcaatagccagacatggaattcat
ggcttgtacatgacctttgatattcaaattccagggactatacttcaaattggtgaaaat
ataatatatttgaagcaagcttcagctaatggtccttttaatggactaatgtatgactat
attcgtcttgaaggtcctccacaataa
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