Nicotiana attenuata (coyote tobacco): 109244361
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Entry
109244361 CDS
T05870
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109244361
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109244361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109244361
NCBI-ProteinID:
XP_019266987
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MTNNIGADTVQYTVTDPSDDPLNPKPGTLRYAMTHIQGKVWVTFQRDMTIRLQKPLLVSS
FTTIDGRGVKVNIAHAACLMLQRVTNVIIHGLRIHHCKAQAASTVLGPDKKIVNVGPVDG
DAIRMLTSSKIWIDHNTLFDCEDGLIDVTRGSTDITISNNWFRTQNKVMLLGHDDGFLRD
KNMKVTVAFNYFGPNCNQRMPRVRHGYAHVVNNLYKGWGNYAIGGSMNPSIKSQANYFIA
PKGGKKEITWRKQGGVGEVSWNFQSVEDVFENGASFSESGLGRESVKPNYLPDQAFPVED
GKNVKSLTRNAGALKCSSTSTC
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgactaataatattggagcggacacggtacaatatacggttacagatcctagtgacgat
cccctgaaccctaaacccggaaccctcagatatgcaatgacacatatccaaggaaaggtt
tgggtaacattccaaagagacatgactattaggctccaaaaacccctcttagttagcagt
ttcactaccattgatggccgtggagttaaggttaacattgctcatgctgcttgtctaatg
cttcaaagggtgacaaatgtgataattcatggtctaagaatccaccattgcaaggcacaa
gcagcatcaacagtgttgggacctgataagaaaatagtaaatgtgggtccagtagatgga
gatgcaattagaatgttaacttcttccaagatttggattgaccacaatacccttttcgat
tgtgaagatggtttaattgatgtcactcgtggttctactgatattaccatttccaataat
tggtttcggacccaaaataaggttatgttattaggtcatgatgatggatttcttagagac
aagaacatgaaggttactgttgcattcaattattttggtcctaattgcaaccaaagaatg
ccaagggttcgtcatggatatgcacatgtggtcaacaatctatacaagggatggggaaat
tacgcaatagggggaagcatgaacccaagcattaagagccaagccaattatttcattgca
cctaaaggaggaaagaaagagataacatggagaaagcagggtggagttggtgaagtatca
tggaatttccaatctgttgaagatgtatttgagaacggagcatctttcagcgaatcgggt
ttgggtcgtgagtccgtgaagccaaactatctgccagatcaagcttttccagtggaagat
ggaaaaaatgtcaagtccttgacaagaaatgctggtgctctgaaatgttcctctacttct
acctgctga
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