Nicotiana attenuata (coyote tobacco): 109244701
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Entry
109244701 CDS
T05870
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109244701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109244701
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109244701
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
109244701
NCBI-ProteinID:
XP_019267381
UniProt:
A0A1J6IN02
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Position
2:complement(17220791..17227128)
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AA seq
584 aa
AA seq
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MNPSLKKPRESVDLLNESTASPFPDEVLEKVLSLVQSHKDRNSASLVCKDWYNAERWTRT
KLFIGNCYSVSPDIVARRFPKIKSVTLKGKPRFSDFNLVPENWGADIQAWLDVFAKVYPF
LEELRLKRMTVSDESLEFLAKSFHGFKALSLLSCDGFSTDGIKSIATYCKRLTELDIQEN
GMDDIAGSWLSCFPDDFASLEVLNFASLNSEISFDALERLVSRCKSLRVLKVNKNINLDQ
LQRLLVRAPQLMELGTGSFHQELTSQQFAQVESAFSNCKNLHTLSGLWDATSLYLPVLYA
ACASLTFLNLSYATIGSGELSKLLGHCPNLRRLWVLDTVEDKGLEAVGISCPLLEELRVF
PADPFDQDIVHGVTESGFVAVSAGCPKLQYVLYFCRQMTNAAVAKIVRNCPDFTHFRLCI
MNPGQPDYLTNEPMDEAFGAVVKTCTKLQRLSVSGLLTDQTFEYIGKYAKNLETLSVAFA
GSSDWGMQCVLDGCSKLRKLEIRDCPFGNAALLSGLDKYESMRCLWMSACNVTMNGCRLL
AKEMPRLNVEVIKDEDSDDYADKVYVYRSVAGPRRDAPPFVKTL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccagcttgaaaaaaccgagggaatcggtggatttattgaatgagtcaacagca
tcaccattcccagatgaggtgttggagaaggtgctgtcacttgtgcagtctcacaaggac
agaaactcagcttcattggtttgtaaggattggtacaatgcagagcgttggacaaggact
aagttgttcatcgggaactgctattcggtctctcctgatattgtagcaagaagatttccc
aagattaagagcgttacccttaaagggaagcctagattttctgactttaatttggtgcca
gagaattggggtgctgatattcaggcttggcttgatgtttttgccaaagtttaccccttt
cttgaggagttgaggttgaagaggatgactgttagtgatgagagtttggagtttttggct
aaatcatttcatggatttaaggctctctctttgttgagttgtgatggttttagcactgat
gggatcaaatccattgctacttactgcaagaggttgacagagctggacattcaggagaat
ggcatggatgatattgctggtagttggctaagttgttttccggatgactttgcatcactg
gaggtgttaaactttgccagtctgaacagtgagatcagtttcgatgccctagaaagactt
gtcagtaggtgcaaatcgctgagggttctgaaggtgaataagaacattaacttggatcaa
ttgcaacgcctgcttgtccgggctcctcagttgatggaactcggtacaggatcctttcat
caagaactcacgagtcagcagttcgcacaagttgaaagtgcattcagcaactgcaaaaat
ctgcacactctctcgggtttatgggatgcgacttctctatatttaccagttctttatgca
gcctgtgctagtctgactttcctcaacttgagctatgcaaccattgggagtggtgaatta
tcgaagcttcttggtcattgcccaaatttaagacgcctttgggtccttgacactgtcgaa
gacaagggattagaggctgttggaatcagctgccctttgcttgaagaactgcgagtcttt
cctgctgacccttttgaccaggatattgtccatggggtgacggagtcgggctttgtagct
gtttctgccggttgtcctaagcttcaatatgttctctatttctgccggcaaatgactaat
gctgccgttgcaaaaatagtgcgtaactgccctgatttcacccattttcgtctctgcata
atgaatcctggccagccagattacctgacaaatgaaccaatggacgaggcttttggtgca
gtggtcaagacttgtacaaagctccagaggctttccgtttctgggctgttaactgatcag
acgtttgagtacatcgggaagtatgctaaaaaccttgagacactttcagtggcttttgct
ggaagcagtgactggggtatgcagtgtgtgcttgacggctgttctaagctgaggaagctg
gagataagggattgtccattcggaaatgcagcacttctttccggactggacaagtatgaa
tccatgcggtgtctttggatgtcagcttgcaatgtcaccatgaatggttgtcgactactt
gcaaaagagatgcctaggttgaatgtcgaggtaatcaaagatgaggacagcgatgactat
gctgataaggtgtacgtctatcgttctgtagcagggccacgaagggatgctccacctttt
gttaaaactctttag
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