KEGG   Nicotiana attenuata (coyote tobacco): 109245039
Entry
109245039         CDS       T05870                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 8A-like isoform X1
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03020  RNA polymerase
nau03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109245039
  09124 Replication and repair
   03420 Nucleotide excision repair
    109245039
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nau03021]
    109245039
   03400 DNA repair and recombination proteins [BR:nau03400]
    109245039
Transcription machinery [BR:nau03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     109245039
  RNA polymerase III system
   RNA polymerase III
     109245039
  RNA polymerase I system
   RNA polymerase I
     109245039
DNA repair and recombination proteins [BR:nau03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109245039
SSDB
Motif
Pfam: RNA_pol_Rpb8 LYRM_2
Other DBs
NCBI-GeneID: 109245039
NCBI-ProteinID: XP_019267760
UniProt: A0A314KYD1
LinkDB
Position
Unknown
AA seq 218 aa
MFDKIPQPIVFQEFQKNGKRVDMGQCRDSRKKTERVLSLYQRILRSQNSSTELCSKGSKE
GLKSLQYLMLASRSDLSVQLTVILALLNALLRFKKVSRIEAESQDGNTFCQLVIIRELYS
VHPNELYRMVISEVDKENPDESDFAGYLPEGKQKSPADQFEFIMQGKVYNVSTDTSGSDT
KAVVHISFGGLQFMLKSDPAKLQRFKRGQRVLLLMTKV
NT seq 657 nt   +upstreamnt  +downstreamnt
atgttcgataaaattcctcaaccaattgtcttccaagaatttcaaaaaaatggcaaaaga
gttgatatgggacagtgcagagactcaagaaagaaaacagagcgagttctatctctgtat
cagcgaatattgaggagccagaattcctctactgaactttgcagcaagggttcaaaagaa
gggctgaaatctttgcagtatttaatgctggcctctaggagtgatctctccgtacaattg
acggtcatattggcgctgctgaatgctcttctccgttttaagaaagtttctcgcatagaa
gcagaaagtcaagatggaaacacattttgccagctagtgatcatccgagagttatattct
gttcatccgaatgaattgtataggatggttatttcagaggtagacaaagaaaatcctgat
gagtcagattttgctggctatcttcctgagggaaagcagaaatcacctgccgaccaattt
gaattcatcatgcaagggaaagtgtataatgtctcaacggatacatcaggatctgacact
aaagcagtggttcatatctcctttggtggacttcagtttatgctgaaaagtgacccagcc
aagttgcaaaggtttaagcggggccagagggtccttcttcttatgacgaaggtgtga

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