Nicotiana attenuata (coyote tobacco): 34583158
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Entry
34583158 CDS
T05870
Symbol
rpoA, CPT59_pgp031
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
34583158 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nau03021
]
34583158 (rpoA)
03400 DNA repair and recombination proteins [BR:
nau03400
]
34583158 (rpoA)
Enzymes [BR:
nau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
34583158 (rpoA)
Transcription machinery [BR:
nau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
34583158 (rpoA)
DNA repair and recombination proteins [BR:
nau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
34583158 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
34583158
NCBI-ProteinID:
YP_009429482
UniProt:
A0A286RX64
LinkDB
All DBs
Position
CP:
Genome browser
AA seq
337 aa
AA seq
DB search
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRVKFEKVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTSDASICVKGPGYVTAQD
IILPPYVEIVDNTQHIASLTEPIDFCIGLQIERNRGYLIKTTHNFQDGSYPIDAVFMPVR
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEDNLYLQ
DNQHTVPLSPFTFHDKLAKLIKNKKKIALKSIFIDQSELPSRIYNCLKMSNIYTLLDLLN
NSQEDLMKIEHFRSEDVKQILGILEKYFVIDLAKNKF
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaagtaacagtatctactcggacactacagtggaagtgtgttgaatca
agaacagacagtaaacgcctttattatggacgctttattctgtctccacttatgaaaggc
caagccgacacaataggcattgcgatgcgaagagcgttacttggagaaatagaaggaaca
tgtatcacacgtgtaaaatttgagaaagtcccacatgaatattctaccataacgggcatt
caagaatcggtacatgaaattttaatgaatttgaaagaaattgtattaagaagtaatctc
tatggaacttctgacgcatctatttgtgtcaagggtcctggatatgtaactgctcaagat
atcatcttaccgccttatgtcgaaatcgttgataatacacaacatatagccagtttaacg
gaaccaattgatttttgtattggattacaaatagagagaaatcgtggatatcttataaaa
acgacacataactttcaagatggaagttatcctatagatgctgtattcatgcctgttcga
aacgcgaatcatagtattcattcttatgggaatgggaatgaaaaacaagagatacttttt
ctcgaaatatggacaaacggaagtttaactccgaaagaagcacttcatgaagcatcccga
aatttaattgatttatttattccctttttacatatggaggaagacaacttatatttacag
gacaatcaacacacggttcctttatccccttttacctttcatgataaattggctaaactc
ataaaaaacaaaaaaaaaatagcattgaaatcgatttttattgaccaatcagaattgcct
tccaggatctataattgcctcaaaatgtccaatatatatacattgttggaccttttgaat
aacagccaagaagatcttatgaaaattgaacattttcgtagcgaagatgtaaaacagata
ttgggcattttagaaaaatatttcgtaattgatttagcaaaaaataagttttaa
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