Natronoglycomyces albus: JQS30_04370
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Entry
JQS30_04370 CDS
T07203
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
nav
Natronoglycomyces albus
Pathway
nav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JQS30_04370 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nav03021
]
JQS30_04370 (rho)
03019 Messenger RNA biogenesis [BR:
nav03019
]
JQS30_04370 (rho)
Transcription machinery [BR:
nav03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
JQS30_04370 (rho)
Messenger RNA biogenesis [BR:
nav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JQS30_04370 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
NACHT
Spore_III_AA
PIP5K
AAA
Motif
Other DBs
NCBI-ProteinID:
QSB06953
UniProt:
A0A895XU01
LinkDB
All DBs
Position
1033036..1034814
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AA seq
592 aa
AA seq
DB search
MLMPELQQLAQTLGITGVGRMRKSELITAIQANQANQGGLGDNGGSAEQEAPPVTEPDKT
SSTVETAAAGTESTESAVEASARGRRATRPAGPPQPRKHSQAEEATDVAAESNDDKNADN
DRPNRQRRRVRSQNNDADRATAQTSDRSSSDRDDNADDRGSRSERRDFDDNGGNRRRNRR
HRDRSDRDRRRGGRDRAEQRSERNENTNSEDEQLLPVAGILDILDSYAFIRTTGYLAGPD
DVYVSMSQVRKNKLRRGDAITGAVKPTRGDDDRGNKRREKYNPLIRLDTVNGMSSEEARN
RDEFYKLTPLYPQERLRLETEAHLLTTRVIDLVTPIGKGQRALIVSPPKAGKTMVMQAIA
NAITTNNPECHLMVVLIDERPEEVTDMQRSVKGEVISSTFDRPPSDHTTVAELSIERAKR
LVELGHDVVVLLDGITRLGRAYNNASPASGRILSGGIDSTALYPPKRFLGAARNIENGGS
LTILATALVETGSMGDTVIFEEFKGTGNAELKLDRKIADKRVYPAVDVHQSSTRKDDLMM
GADEQAIMLKLRRVLGSLEQQQAIDLLLDRLKKTKTNAEFLMQIVKTTPGGD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgccggagctgcaacaactggcgcaaaccctcggcatcacgggcgttggccgg
atgcgcaagagcgagctgatcaccgcgatccaagccaaccaagccaatcagggcggtctt
ggcgacaacggtggcagcgcagaacaggaggctccgccagtgacagagccagataagact
tcatccaccgtcgaaaccgcggctgcgggtaccgagagtaccgagtctgccgtcgaggca
tccgctagaggccgtcgcgccacgcgccccgccggcccgcctcagccacgcaagcactcc
caagccgaagaggctacggacgttgcggcggaatcgaacgacgacaagaacgccgacaac
gatcggcccaaccgccagcggcgccgtgtgcgcagccagaacaacgacgcagatcgcgcc
accgcgcaaacgtccgaccgctcctccagcgaccgtgacgacaatgccgatgacagggga
tctcgttctgagcgtcgcgacttcgacgacaacggtggcaaccgccgtcgcaaccgtcgt
caccgcgaccgttccgatcgcgaccgccgtcgtggtggccgtgaccgcgccgagcaacgc
tccgagcgcaacgagaacaccaattctgaggacgaacaactcctgcccgtcgccggaatt
ctcgacatcctcgactcttatgccttcatccgcaccaccggctacttggccggacccgac
gacgtctatgtgtcgatgtcgcaggtgcgcaagaacaagctgcgtcgaggtgacgcgatc
accggtgccgtcaagcccacccgaggcgacgacgaccggggtaacaagcgccgcgagaag
tacaacccgctcattcggctcgacaccgtcaacggaatgagttccgaagaggccaggaac
cgcgatgagttctacaagctcacgcctctgtacccgcaggagcgactgcgcctggagacc
gaggcgcacttgctgaccacgcgagtcatcgacctggtgactccgattgggaagggacag
cgcgcccttatcgtctcaccgcccaaggccggtaagacgatggtcatgcaggccatcgcg
aacgcgatcacgacgaacaacccggagtgtcacctcatggtggtactcatcgacgagcgg
cccgaagaggtcaccgacatgcagcgctcggtcaagggtgaggtcatctcctcgaccttc
gaccgtccgccgtcggaccacaccacggtcgccgagctgtccatcgagcgcgccaagcga
ctcgtggaactgggacacgacgtggtggtgttgctcgatggcatcacgcggctgggccgg
gcctacaacaacgccagccctgcctcgggtcgtatcctctccggcggtatcgactcgaca
gcgctgtacccaccgaagcgtttcctgggcgcggctcgcaacatcgaaaacggcggttcg
ttgacgatcttggccaccgcgttggtcgagaccggctccatgggcgacacagtgatcttc
gaagagttcaagggcaccggtaacgccgagctcaaacttgaccgcaagatcgccgacaag
cgcgtctacccagcggtcgatgtgcaccagtcgtccacgcgcaaggatgacctcatgatg
ggggccgacgagcaggccatcatgctcaaactgcggcgcgtcctcggttcgctggaacag
caacaggccattgacctgctgttggaccgtttgaagaagacgaagaccaacgccgaattc
ttgatgcagatcgtcaaaaccactcccggcggcgattag
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