Natronoglycomyces albus: JQS30_05090
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Entry
JQS30_05090 CDS
T07203
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
nav
Natronoglycomyces albus
Brite
KEGG Orthology (KO) [BR:
nav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nav03019
]
JQS30_05090 (hrpA)
Enzymes [BR:
nav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
JQS30_05090 (hrpA)
Messenger RNA biogenesis [BR:
nav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JQS30_05090 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
ResIII
NACHT
Cas3-like_C_2
TsaE
T2SSE
PhoH
ABC_tran
NTPase_1
Zeta_toxin
SLFN-g3_helicase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QSB06285
UniProt:
A0A895XSR3
LinkDB
All DBs
Position
1197794..1201702
Genome browser
AA seq
1302 aa
AA seq
DB search
MPRRCVSWIIVMSAPEKKRGNGARRRAHSRSRPPARPRFSDETIQARAAAVPSITYPAEL
PVSQRRDDIAKAIEDNQVVIIAGETGSGKTTQIPKICLELGRGVTGMIGHTQPRRIAARS
VAERIAEELNSPLGEAVGWKVRFSDRVSDSSYIKLMTDGILLTELQHDRMLSAYDTIIID
EAHERSLNIDFILGCLKQLLPKRPDLKVIVTSATIDPERFATHFCDRNGRPAPILEVSGR
TYPVEIRYRPLEAPDEEGQEDSEPRDQIDAILDAVNELSRIDSGDILVFLSGEQEIRDTA
EALEKAHLRHTEVVPLYARLSAEEQHRVFKPHTGRRIVLATNVAETSLTVPGIRYVIDPG
FARISRYSARTKVQRLPIEAISQASANQRAGRCGRVAEGVCIRLYSEEDFLARPEFTDAE
ILRTNLASVILQMTAAKLGKVETFPFVDAPDERNIKDGTELLFELGALELRKGQPPRLTK
LGRQISRLPIDPRLARMILQAKEEGCVHEVTVIAAALSIQDPRERPSDKKQAADASHARF
ADPTSDFLAYLNLWKYLEDEKRSRSGSGFRRMCKKEFLHYLRIREWQDLYRQINGGLKSL
KIANREVAQNRAGRRETAEAGTVDTERLHTALLAGLLSHVGLKEADKREYLGARNAKFAV
FPGSSLFKKQPRWVVAAELVETSRLWGRICARIEPEWIEPLATHVTKRTYSEPHWSKKAG
AVLGYERVTLYGVPIVARRKVNFGRIDQALSRELFIRGALVEGEWETHHEFFQANRNLLA
EVEDLENRVRRRDLLSDEQTLFDFYDARLPADIVSERHFDSWWKQAKRETPDLLNFEYSL
LVADRAEGISKENYPSQWTSENIDLDLAYEFDPGKATDGITVEVPLDALPQLDQDSFTWN
VPGMREELAASLIRSLPKGLRRNFVPAPDFAVAAVARMDPASGKPMTAALSETLRAMTGV
IVPEDAYDVTKIPGHLQMTYQVTDEDGTVVATGKELGALQRQLAPKAHEAMAEAAPELER
EGLTTWDFDHLPQLHETPRKGYVAKAYPALADRGNTVSVTCFATEAEQSANMWAGTRRLL
QLNIPDPHIKEALTRAETLNLAASAYPSAEALLDDCRRCVLDKILIEAGGPAWDQEGFAA
LLKRARPELAAESVAVARKVAAILQQARAARKLLEGKFSFDMLPALSDMKTQLDALVGSE
GFVGATGWWRLDDLQRYIKGIVARAQRLPRDVEADRRRMEQVVGLCAERDRLASARPHAL
RTAEGQELRWMIEELRVSLFAQELGTRYQVSEKRVRRLLQAL
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgccccgccgatgcgtatcctggattatcgtcatgtctgctcctgagaaaaaacgtgga
aacggcgctcgacgccgagcgcattcccgtagccgcccgccagctcgcccccggttctcc
gatgagaccatccaggcgcgtgccgccgccgtaccctcgatcacctacccggctgagctg
cccgtcagccaacgccgtgatgacatcgccaaggcgatcgaggacaaccaagtggtcatc
atcgccggggaaaccgggtcgggtaagaccacccagattccgaagatttgcctcgaactg
ggtcgcggtgtcaccggcatgatcgggcacacccagccgcgccgtatcgcggcgcggtcg
gtggccgaacgcattgccgaggaactgaactcgccgctgggcgaagcggtgggctggaag
gttcgttttagcgaccgagtgtccgattccagttacatcaagctcatgaccgacggcatc
ctcttgaccgagctgcaacatgaccggatgctctccgcctacgacacgatcatcatcgac
gaggcgcatgagcgcagcctcaatatcgacttcatcctcggttgcctcaaacagttgctg
cccaagcggccggacttgaaagtcatcgtgacctccgcgactatcgacccggagcgtttc
gccacccacttttgcgaccgcaacggcaggcccgcgccgattctggaggtgtccggacgc
acctatccggtcgaaatccgctatcgcccgctggaagccccggatgaagagggccaagaa
gactccgagccgcgcgaccagatcgacgcgatcttggacgcggtcaacgagttgtcccgc
attgactctggcgacattctcgttttcctctccggggaacaagagatccgcgacacggcc
gaggccttggaaaaggcgcatctgcggcataccgaagtagttccgctgtatgcgcggttg
tcggccgaggaacaacatcgggttttcaagccacacaccggccgtcgtatcgtcttggcc
accaacgtggccgagacgtcgttgacggtgccgggcattcgctatgtcatcgatcccggt
tttgctcgaatctcccgctactcggctcgcacgaaggtgcagcggctgccgatcgaagcc
atctcgcaggcgtctgccaatcaacgagctgggcgttgcggtcgtgtcgccgagggcgtg
tgcatccggttgtactcggaggaggatttcctcgctcgccccgagttcaccgacgcggag
atcctgcgaacgaacctcgcctcggtcattttgcagatgacggccgcgaagctgggcaag
gtggagacgttcccgttcgtggatgctcccgacgaacgcaatatcaaagatggcaccgag
ttgctctttgagctaggggcgctagagctacgcaaagggcaaccaccgcgattgaccaag
ctcgggcgccagatctcccggctacccatcgacccgcgcttggctcgcatgatcctccaa
gccaaggaggagggctgcgtccacgaagtcaccgtcatcgccgccgcgctgtcgattcag
gacccccgggaacgccccagcgacaagaaacaggccgccgatgcctcgcacgcccgcttt
gccgaccccacctcggacttcctcgcctacttgaacctgtggaagtacttggaagatgag
aaacgctctcggtctggttcgggcttccgccgtatgtgcaagaaggaatttctgcactat
ttgcggattcgggaatggcaggacctatatcggcagatcaatggtggcctcaagagcctc
aagatcgctaaccgcgaggtggcccagaacagggccgggcggcgtgaaacggctgaggct
ggcacggtggacaccgaacgtctccataccgcgctgttggccggtttgctcagccacgta
ggtctcaaggaggccgacaagcgcgaatacctaggcgcgcgtaacgccaaattcgcggtc
ttccctggttccagcttgtttaagaagcaaccccgctgggttgtcgccgccgaactggtc
gaaacctcgcgattgtgggggcgtatttgcgcccggatcgaaccagagtggatcgaaccg
ctggccacccacgtcaccaaacgcacctattcggagccgcactggtcgaagaaggcgggc
gccgtactcggatatgagcgcgtcacgctctacggcgtaccgatcgttgctcgtcgcaag
gtcaacttcgggcgcatcgatcaggcgctctcgcgtgaacttttcattcggggggctttg
gtcgaaggcgagtgggagactcatcatgaattcttccaagccaaccggaatctgctggcc
gaagtcgaagatctagagaaccgggtgcgtcgtcgcgacctgctctccgatgagcagact
ctgtttgacttctacgacgcccgattgcccgctgacatcgtctccgaacgccacttcgat
tcgtggtggaagcaggccaagcgggaaacgccggacctgttgaactttgagtacagtctg
ctcgtggccgaccgggccgagggcatcagcaaggagaactacccttcacagtggacctct
gagaacatcgacctcgaccttgcctacgaattcgatccgggcaaggccaccgacgggatc
accgtcgaggtgccgctggacgcgctaccgcaactggaccaagactcctttacctggaat
gtgcccggtatgcgcgaggaactggccgcctcgctcatccgcagcctgcccaaggggctg
cgacgcaacttcgtgcccgcccccgacttcgccgtcgcggcagtggcccggatggacccc
gccagcggcaaacccatgaccgccgcgctgtcggagaccctccgtgccatgaccggggtg
atcgtccccgaagacgcctatgacgtgaccaagattcccgggcacctacaaatgacctac
caggtcactgatgaggacggcacggtcgtggccacgggtaaggagctgggagccctgcaa
cgtcaactggctccgaaagcacacgaggccatggctgaggccgcacccgaactcgaacgc
gagggcctcacaacctgggacttcgaccacctgccacagctacatgagacgccacgcaag
ggctatgtggccaaggcctacccggccttggccgatcggggcaacaccgtcagcgtgacc
tgttttgccactgaggccgagcagtcggcgaatatgtgggcgggcacgcgccgactgctg
caactgaacatccccgacccacacatcaaggaggcgttgacgcgggccgagacgctgaat
ctcgccgccagcgcctatccgtcggctgaggcgctgttggatgattgtcggcggtgcgtg
ttggacaagattctgatcgaagctggcggacccgcgtgggatcaagaaggctttgcggcc
ttgctcaagcgggcccgtccggagttggccgccgagtcggtcgcggtggcgcgtaaggtg
gccgcgatcttgcaacaagcgcgcgcggcaaggaagcttttggaaggtaagttcagcttc
gacatgcttcccgcgctatcggacatgaagacgcaactggacgcgttggtggggtccgag
ggcttcgtcggggcgaccggatggtggcggctggacgatctgcagcgttatatcaagggg
atcgtggccagagcgcagcgtctgccgcgcgatgtcgaggcggatcggcggcggatggag
caggtggtcggtttgtgcgccgagcgtgaccgcctcgctagtgcgcgtccgcacgccttg
cggaccgccgagggccaagagttgcgctggatgatcgaggagctgcgcgtgagcttgttc
gcccaggaattggggacgcggtaccaagtcagtgagaagcgcgtcaggcggctattgcaa
gcgctgtaa
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