Natronoglycomyces albus: JQS30_10920
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Entry
JQS30_10920 CDS
T07203
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
nav
Natronoglycomyces albus
Pathway
nav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JQS30_10920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nav03019
]
JQS30_10920
Messenger RNA biogenesis [BR:
nav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JQS30_10920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
YicC-like_C
Motif
Other DBs
NCBI-ProteinID:
QSB04310
UniProt:
A0A895XPV4
LinkDB
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Position
complement(2575516..2577207)
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AA seq
563 aa
AA seq
DB search
MSWVSRDNLPEPPELPAGALRVTALGGLGAIGRNMTVFEINGRILIVDCGVLFPDVDQPG
VDLILPDFSSLLDRLEDIEAIVLTHGHEDHIGGVPYLLEHRKDIPLVGSEFTIALIEAKL
RERRIKPVTQTVTAGESTEVGPFGLEFLAVNHSIPDALAVGIRTEAGLCLHTGDFKMDQL
PLDGRITDLAGFARMGTQGVDLLLSDSTNAEVPGFVTSEREIGPVLEDIFAGAEGRIIVA
SFASHVHRVQQVLDAAEKHGRKVAFIGRSMVRNMGIARDLGLLKIPGGLMVSMDDAVKLE
NDEIVFMSTGSQGEPMSALGRMASGDHRHITVDEGDTVVLASSLVPGNETAVYGVINRLS
RTGATVVHKDVAKVHVSGHAPAGELLYVLNTVKPSNMMPVHGEARHLQAHARLAVESGVP
ADQVMLVENGEVVDLIDGRARVTGRIPIKHVYVDGLAVGDVGEPVLSERRILGDGGFISA
TVVIDSENGKVVGGPTVSGKGFSEDPKIFNDVLPLIEGAMERAAGEGVTDPHELQQILRR
TVGRWVNENYRRRPMIVPHVLEV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagttgggttagccgcgacaacctgcccgaaccgccagaactccccgccggagcgctt
cgcgtcaccgccctaggcgggctgggcgccatcggccgcaacatgacggtcttcgaaatc
aacggccgcatcctcatcgtcgactgcggggtcctctttcccgacgtcgaccagccgggc
gttgacttgatcctgcccgacttctcctccctgctcgaccgcctcgaagacatcgaggcc
atcgtgctcacccacggccacgaagaccacattggtggcgtcccctacctgctggaacac
cgcaaggacatcccgctggtcggctccgaattcaccatcgccctcatcgaggccaagcta
cgggaacggcgcatcaaacccgtcacccagactgtgacggctggcgagtcgaccgaggtc
ggcccgttcggcctggaattcctggccgtgaaccactcgatccccgacgcgctggcggtc
ggcatacgcaccgaggcgggcctgtgtctgcacaccggtgacttcaagatggaccaactg
ccactggatgggcggatcacggacctggccgggtttgcccgcatgggaacgcagggcgtg
gacctgctgctatcggattcgaccaatgccgaagtccctggttttgtcacgtccgaacgt
gagatcgggccggtgctggaggacatcttcgccggggccgagggccgcatcatcgtcgcg
tctttcgccagccacgtgcaccgagtgcagcaagtgctcgatgccgcagagaagcacgga
cgcaaggtcgccttcatcggccgttcgatggtgcgcaatatgggtatcgcccgtgatctg
ggactgctgaagatcccaggcgggttgatggtgagcatggacgatgcggtgaagctggag
aacgacgagatcgtcttcatgtcgaccggttcgcaaggcgagccgatgtcggctttgggg
cgcatggcctcgggcgatcaccgacacatcaccgtggacgaaggtgacacggttgtcctg
gcgtcttcgctggtgccgggcaacgagacggccgtttatggcgtgatcaaccgtctgtcg
cgcactggcgcgaccgtggtgcacaaggacgtggcgaaggtccacgtctcaggccacgcc
ccggccggggagttgctgtatgtgttgaacaccgtcaagccttcgaacatgatgccggtg
cacggggaagcgcggcacctgcaggcgcacgcccgtctcgcagtcgagtccggggtgccc
gccgaccaggtcatgctggtggagaacggcgaggtcgtggacctgatcgatggccgggct
cgggtgaccgggcgaatcccaatcaagcatgtctatgtggacgggctcgccgtgggcgat
gtgggggagccggtgctctcggaacgtcgcattctcggtgacggtggattcatctccgcg
accgtggttatcgactcggagaacggcaaggtcgttggcggtccgacggtttcgggcaag
ggtttctctgaggacccgaagatcttcaatgacgtgctgcctctgatcgagggcgcgatg
gaacgagctgctggcgaaggagtgaccgacccgcatgagctgcaacagattctgcggcgc
acggtcggacgctgggtcaacgagaactatcgtcgccgtcccatgatcgtcccgcacgtc
ctcgaggtttag
DBGET
integrated database retrieval system