KEGG   Natronoglycomyces albus: JQS30_10920
Entry
JQS30_10920       CDS       T07203                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
nav  Natronoglycomyces albus
Pathway
nav03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nav00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JQS30_10920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nav03019]
    JQS30_10920
Messenger RNA biogenesis [BR:nav03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     JQS30_10920
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B_2 Lactamase_B Anti-Pycsar_Apyc1 YicC-like_C
Other DBs
NCBI-ProteinID: QSB04310
UniProt: A0A895XPV4
LinkDB
Position
complement(2575516..2577207)
AA seq 563 aa
MSWVSRDNLPEPPELPAGALRVTALGGLGAIGRNMTVFEINGRILIVDCGVLFPDVDQPG
VDLILPDFSSLLDRLEDIEAIVLTHGHEDHIGGVPYLLEHRKDIPLVGSEFTIALIEAKL
RERRIKPVTQTVTAGESTEVGPFGLEFLAVNHSIPDALAVGIRTEAGLCLHTGDFKMDQL
PLDGRITDLAGFARMGTQGVDLLLSDSTNAEVPGFVTSEREIGPVLEDIFAGAEGRIIVA
SFASHVHRVQQVLDAAEKHGRKVAFIGRSMVRNMGIARDLGLLKIPGGLMVSMDDAVKLE
NDEIVFMSTGSQGEPMSALGRMASGDHRHITVDEGDTVVLASSLVPGNETAVYGVINRLS
RTGATVVHKDVAKVHVSGHAPAGELLYVLNTVKPSNMMPVHGEARHLQAHARLAVESGVP
ADQVMLVENGEVVDLIDGRARVTGRIPIKHVYVDGLAVGDVGEPVLSERRILGDGGFISA
TVVIDSENGKVVGGPTVSGKGFSEDPKIFNDVLPLIEGAMERAAGEGVTDPHELQQILRR
TVGRWVNENYRRRPMIVPHVLEV
NT seq 1692 nt   +upstreamnt  +downstreamnt
atgagttgggttagccgcgacaacctgcccgaaccgccagaactccccgccggagcgctt
cgcgtcaccgccctaggcgggctgggcgccatcggccgcaacatgacggtcttcgaaatc
aacggccgcatcctcatcgtcgactgcggggtcctctttcccgacgtcgaccagccgggc
gttgacttgatcctgcccgacttctcctccctgctcgaccgcctcgaagacatcgaggcc
atcgtgctcacccacggccacgaagaccacattggtggcgtcccctacctgctggaacac
cgcaaggacatcccgctggtcggctccgaattcaccatcgccctcatcgaggccaagcta
cgggaacggcgcatcaaacccgtcacccagactgtgacggctggcgagtcgaccgaggtc
ggcccgttcggcctggaattcctggccgtgaaccactcgatccccgacgcgctggcggtc
ggcatacgcaccgaggcgggcctgtgtctgcacaccggtgacttcaagatggaccaactg
ccactggatgggcggatcacggacctggccgggtttgcccgcatgggaacgcagggcgtg
gacctgctgctatcggattcgaccaatgccgaagtccctggttttgtcacgtccgaacgt
gagatcgggccggtgctggaggacatcttcgccggggccgagggccgcatcatcgtcgcg
tctttcgccagccacgtgcaccgagtgcagcaagtgctcgatgccgcagagaagcacgga
cgcaaggtcgccttcatcggccgttcgatggtgcgcaatatgggtatcgcccgtgatctg
ggactgctgaagatcccaggcgggttgatggtgagcatggacgatgcggtgaagctggag
aacgacgagatcgtcttcatgtcgaccggttcgcaaggcgagccgatgtcggctttgggg
cgcatggcctcgggcgatcaccgacacatcaccgtggacgaaggtgacacggttgtcctg
gcgtcttcgctggtgccgggcaacgagacggccgtttatggcgtgatcaaccgtctgtcg
cgcactggcgcgaccgtggtgcacaaggacgtggcgaaggtccacgtctcaggccacgcc
ccggccggggagttgctgtatgtgttgaacaccgtcaagccttcgaacatgatgccggtg
cacggggaagcgcggcacctgcaggcgcacgcccgtctcgcagtcgagtccggggtgccc
gccgaccaggtcatgctggtggagaacggcgaggtcgtggacctgatcgatggccgggct
cgggtgaccgggcgaatcccaatcaagcatgtctatgtggacgggctcgccgtgggcgat
gtgggggagccggtgctctcggaacgtcgcattctcggtgacggtggattcatctccgcg
accgtggttatcgactcggagaacggcaaggtcgttggcggtccgacggtttcgggcaag
ggtttctctgaggacccgaagatcttcaatgacgtgctgcctctgatcgagggcgcgatg
gaacgagctgctggcgaaggagtgaccgacccgcatgagctgcaacagattctgcggcgc
acggtcggacgctgggtcaacgagaactatcgtcgccgtcccatgatcgtcccgcacgtc
ctcgaggtttag

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