Natronoglycomyces albus: JQS30_11400
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Entry
JQS30_11400 CDS
T07203
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
nav
Natronoglycomyces albus
Brite
KEGG Orthology (KO) [BR:
nav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nav03016
]
JQS30_11400
Enzymes [BR:
nav01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
JQS30_11400
Transfer RNA biogenesis [BR:
nav03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
JQS30_11400
Prokaryotic type
tRNA splicing ligases
JQS30_11400
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QSB04396
UniProt:
A0A895XPE7
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All DBs
Position
complement(2680537..2681736)
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AA seq
399 aa
AA seq
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MTFTELVKQGHRATAPIRLWGDPDAVEDSARQQLHNIAALPWVHGVAVMPDVHYGKGATV
GSVIAMQGAVSPAAVGVDIGCGMTAQLTSLTAADLPDNLRKLRANIERDIPVGRGAHKRA
VDPDAIKLDIGHWWEFWNGFSDLVKGASSSLKGKAHKQMGTLGGGNHFIEVCLDGQDRVW
LMLHSGSRYIGNALAMHHIEKAKQLPHNQDLPDPDLAVFVADTPQMRQYRQDLYWAQEYA
KRNRAVMMGLLRGVIRRQFPTVSFEPEISAHHNYVSEETHDGQELLVTRKGAIRAGRGDM
GIIPGSMGAASFIVRGLGNGNAYDSASHGAGRKMSRTKARNEFTAEDLRAQTAGVECRKD
GGVIDEIPSAYKDIHEVMAAQTDLVEIVAQLKQIVCVKG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgacttttaccgaactcgtcaagcaaggccatcgcgccacggctcccattcgcctatgg
ggagacccagacgcagtcgaagactccgcgcgtcaacaactgcacaacatcgccgccctg
ccttgggtacatggagtggcggtcatgcccgacgtccactacggcaagggcgcgactgtc
ggatcggtgatcgcgatgcaaggagcggtgtcgcccgcagctgtcggcgtcgacatcggc
tgcggaatgactgcccagctcacctcgctgacagccgctgacctgcccgataacctgcgc
aaactgcgtgccaacattgagcgagacattccggtcgggcgtggagcccacaagcgggcc
gtcgaccccgatgcgatcaagctcgacatcggccactggtgggagttctggaacggattc
tccgacctcgtcaagggagcctcctcgtcgctgaagggcaaagcgcacaagcagatggga
accctcggcggcggtaaccacttcatcgaagtgtgcctcgacgggcaagaccgcgtatgg
ctgatgctgcactccggttcccgctatatcggtaacgcgctggcgatgcaccacatcgag
aaggccaagcagctgcctcacaaccaggacctgcctgatccggacctggcggtgttcgta
gccgacaccccacagatgcggcaataccgccaagacctgtactgggcgcaggaatacgcc
aagcgcaaccgggcggtcatgatgggtctgcttcgtggtgtcatccgccggcagttcccc
acggtctctttcgaacctgagatctcggcgcaccacaactatgtctccgaggagactcac
gatggccaggagctgctcgtcacccggaagggcgcaatacgcgctggacgcggtgacatg
ggaatcattcccggctccatgggcgcggcaagcttcatcgtgcgtgggctgggaaatggc
aatgcgtatgattcggcctcgcatggtgccggtaggaaaatgagccgcaccaaggcgcgc
aacgagttcactgccgaggacctgcgggcgcagaccgctggtgtggagtgccgcaaagac
ggtggcgtgatcgatgagatcccatctgcctataaggacatccacgaagtgatggcggcc
cagaccgacctggtggagattgttgcccagctcaagcagatcgtctgtgtcaagggctga
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