KEGG   Neisseria arctica: LVJ86_00210
Entry
LVJ86_00210       CDS       T08172                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
naw  Neisseria arctica
Pathway
naw03030  DNA replication
naw03410  Base excision repair
naw03420  Nucleotide excision repair
naw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:naw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LVJ86_00210 (polA)
   03410 Base excision repair
    LVJ86_00210 (polA)
   03420 Nucleotide excision repair
    LVJ86_00210 (polA)
   03440 Homologous recombination
    LVJ86_00210 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:naw03032]
    LVJ86_00210 (polA)
   03400 DNA repair and recombination proteins [BR:naw03400]
    LVJ86_00210 (polA)
Enzymes [BR:naw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LVJ86_00210 (polA)
DNA replication proteins [BR:naw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LVJ86_00210 (polA)
DNA repair and recombination proteins [BR:naw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     LVJ86_00210 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LVJ86_00210 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: UOO86719
LinkDB
Position
complement(49393..52176)
AA seq 927 aa
MSQTLLLVDGSSYLYRAFHAMAPLTAPDGTPTGALYGVLNMLRRLRADYPHSHACCVFDA
KGKNFRHDLYPDYKATRPPMPDELRPQAEMLPELVRLMGWPVLVVPNVEADDVIGTLARQ
GEAEGWQVVVSTGDKDMAQLVSERITLVNTMSNETLDIEGVKNKFGVTPAQIRDYLALMG
DKVDNVPGVEKCGPKTAVKWLEAYGTLQSVMENAAAIKGKVGENLQAALPQLPLSYELVT
IKTDIDLHSELPEGLHSLHRKSPRWSQLAVEFKRLNFRTWLKEAEERMHEGNGDLFGSAE
IGEQAAQAALAPTDTQPEKAAAPSNLDYQAITTEAQLAALLNKLEQADTIGIDTETTSLN
PMEAQLVGISMAFAAGEAVYIPLGHTPTAAPEQLDLQTTLSRLKPYLENAALKKIGQNLK
YDQHVFANYGIALNGIAGDAMLASYIIESHLGHGLDELAERWLGLHTITYESLCGKGAKQ
ISFADVALPQATEYAAQDADFALRIESHLKAQMDAKQLEMYEQMELPVAQVLFEMERNGV
LLDKDELARQSHELGRELLDLEQQAYAIAGQPFNLNSPKQLQEILFDKMGIPTKGLKKTA
SGGISTNEAVLETLAPDYPLPNIILQTRSLAKLKSTYTDKLPEMINPQTGRVHTTYAQAV
AITGRLASNNPNLQNIPIRTEEGRRVRRAFIAPAGSVIVSADYSQIELRIMAHLSGDKTL
LAAFQNGEDVHRRTAAEVFGIAPEQVGSDQRRYAKTINFGLIYGMGQYGLAKSLGIDNLS
AKNFIDRYFARYPGVAEYMQRTKEQAAAQGYVETLFGRRLYLPDIRAANANQRAGAERAA
INAPMQGTASDLIKRAMIAVSERLHSEGLQSKLIMQVHDELVLEVPEAEWPKIQTLLPEV
MAAVADGVLNVPLVAEVGMGVNWEEAH
NT seq 2784 nt   +upstreamnt  +downstreamnt
atgtctcaaaccttattactcgttgacggttcttcctatctttaccgcgcctttcacgcc
atggctcctttgaccgcacccgacggtacacccacaggtgcgctctacggcgtattgaat
atgcttcgccgcttgcgtgccgattacccccacagccatgcctgctgcgtatttgatgcc
aaaggtaaaaacttccgccacgatctataccccgactacaaagccacccgcccgcccatg
cccgacgaattacgcccgcaagccgaaatgctgcccgaattggtacgcctgatgggctgg
ccggtattggtcgtacccaatgtagaggcagacgacgttatcggcaccttggcgcgacaa
ggcgaggccgaaggctggcaagtggtggtgtccaccggtgataaagacatggcgcaattg
gtatccgaacgcatcacgctggtgaataccatgagcaacgaaacactggatatcgaaggc
gtgaaaaacaaattcggcgttacccccgcacaaatccgcgattatctggccttgatgggc
gacaaggtcgataacgtgcccggcgtagaaaaatgcggccccaaaaccgcggtgaaatgg
ctggaagcctacggcaccttgcaaagtgtgatggaaaacgccgcagcaatcaaaggcaag
gtaggcgaaaacctgcaagcagccctaccgcaattaccgctttcctatgaattggttacc
attaaaaccgatatcgacttgcacagcgaactgcccgaaggcttgcacagcctacaccgc
aaaagtccgcgctggtcacaattggcggttgaattcaagcgccttaacttccgcacttgg
ctgaaagaagccgaggagcgtatgcacgaaggcaacggcgatttgttcggcagcgccgaa
atcggcgaacaagccgcacaagcagcattggcaccaaccgatacgcagcccgaaaaagcc
gccgccccctcaaaccttgattaccaagccattaccaccgaagcccaactggcagcgtta
ctaaacaaactggaacaagcggatactatcggcatcgatacagaaaccaccagcctcaac
ccgatggaagcgcaattggtcggcatcagcatggcctttgccgcaggcgaagccgtttat
atcccgctcgggcacacgcctaccgccgctccagaacagcttgatttacaaaccacctta
agccgtctgaaaccgtatttggaaaatgccgcactgaaaaaaatcggccaaaacctcaaa
tacgaccaacacgttttcgccaactacggcattgccctaaacggcattgccggcgacgcc
atgctggcttcttatattatcgaaagccatttgggacacggtttggacgaattggcagaa
cgctggctcggcctacacaccattacctatgaatccctatgcggaaaaggcgccaaacaa
atcagctttgccgacgtggcattgccgcaagccaccgaatacgccgcccaagatgccgat
ttcgccctgcgtatcgaaagccatctgaaagcgcaaatggacgccaaacagcttgaaatg
tacgaacaaatggagctgcccgtcgcccaagtattatttgaaatggagcgcaacggcgtt
ttgctcgacaaagacgaactggcgcgccaaagccacgaattggggcgcgaactgcttgat
ttggaacagcaagcctatgcgattgccgggcagcccttcaacctcaattcgcccaaacaa
ctgcaagaaatcctgttcgataaaatgggcattcccaccaaaggactgaagaaaaccgca
tcgggcggcatttccaccaacgaggccgtgcttgaaacactcgcccccgactatccgtta
ccgaatatcattctacaaacccgcagcttagccaaactcaaatccacctacaccgacaag
ctgcccgaaatgatcaatccccaaaccggccgcgtacacaccacctacgcccaagccgta
gcgattaccgggcggctggccagcaacaatcccaacctgcaaaacatccctatccgcacc
gaagaaggccgccgcgtccgccgtgcctttatcgcacccgccggcagcgtcattgtttcc
gccgactactcgcaaatcgagctgcgcattatggcgcatttgagcggtgacaaaaccttg
cttgccgcgttccaaaacggcgaagacgttcaccgccgcaccgcagccgaagtgttcggc
atcgctcccgagcaagtgggcagcgaccaacgccgctacgccaaaaccatcaacttcggc
ctgatttacggcatggggcaatacggcttggccaaatcgctgggcatcgacaacctgtcg
gccaaaaactttatcgaccgctatttcgcccgctacccgggtgtggccgagtacatgcag
cgcactaaagagcaagccgccgcacaaggttacgttgaaaccctattcggccgccgcctg
tatttgcccgatatccgtgccgccaacgccaaccaacgcgccggagccgaacgcgccgcc
atcaacgcccccatgcaaggcaccgcatccgacctgatcaaacgcgccatgatcgccgtt
tccgaacgcctgcattcagaaggcctgcaaagcaaactgattatgcaagtgcatgacgaa
ctggtgctggaagtgcccgaagccgaatggccgaaaatccaaactctgctacccgaagtt
atggccgccgtggcagacggcgtgctgaacgtgccgctggtagcggaagtgggtatgggt
gtgaattgggaagaggcgcattaa

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