Neisseria arctica: LVJ86_00365
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Entry
LVJ86_00365 CDS
T08172
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
naw
Neisseria arctica
Pathway
naw03030
DNA replication
naw03430
Mismatch repair
naw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
naw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVJ86_00365 (dnaE)
03430 Mismatch repair
LVJ86_00365 (dnaE)
03440 Homologous recombination
LVJ86_00365 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
naw03032
]
LVJ86_00365 (dnaE)
03400 DNA repair and recombination proteins [BR:
naw03400
]
LVJ86_00365 (dnaE)
Enzymes [BR:
naw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVJ86_00365 (dnaE)
DNA replication proteins [BR:
naw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LVJ86_00365 (dnaE)
DNA repair and recombination proteins [BR:
naw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LVJ86_00365 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
UOO86747
LinkDB
All DBs
Position
86183..89617
Genome browser
AA seq
1144 aa
AA seq
DB search
MTDPVYIPLRLHTEFSITDGTVRIKQAVKKAAEYGLPALGISDLMNFFGLVKFYKACRGA
GIKPIAAADVWIENPDAPDKPFRAMLVVKNDAGYLRLSELLTAAYVGKDRNVDHTELRQQ
WLAEGDNSGLICLSGAHYGEVGINLMNGHEANAKAAAKKYAAWFPDAFYLELQRLPERPQ
WETSVAGSLEIAAELDLPVVATHPTQFLEADDFEAHEARVCIAGGWVLADKKRPKEFVPG
QYFVSPETMAERFADLPEALQNSVEIAKRCNIHITLGKNFLPQFPTPDGMSLDDYLTLLS
NEGLRERMEVLYPDEAERAAKMPEYQERLDFELQIIIQMGFPGYFLIVQDFINWAKENGC
PVGPGRGSGAGSLVAYALKITDLDPLKYALLFERFLNPERVSMPDFDVDFCQSNRGRVIE
YVREKYGADAVSQIVTFGTMSSKAVIRDVGRVLELPFGLCDKLSKLIPLEANRPVSLEKA
MELEPEIGQLIENEDAGQLIDLAKRLEDLTRGLGMHAGGVLIAPGKISDFSPVYQADESA
SPVSMYDKGDVEDVGLVKFDFLGLRNLTIIEMAQNFIAETCGQKVDVSHIPLDDPATYKI
FSTANTTAVFQFESTGMKKMLQKAKPTKFEEIIAFVSLYRPGPMDLIPDFIDRMHGAKFE
YLHPLLSEVLEPTYGIMVYQEQVMQAAQVCGGYTLGGADLLRRAMGKKKVEEMVKQRATF
VAGAAEKGISQAKADEIFDYMEKFAGYGFNKSHAAAYSLVAYQTAWLKAHYPAEFMAATM
SSELDNTDQLKLFYDDARANGIEFLPPDINESFYRFTPNNQRQIRYALGAVKGTGEGAVE
AIVAARESGGRFTGLLDFCERVGKTHINKRTIESLIRAGAFDSIDPNRAKLIANIDLAIH
NAEQQAANANQGGLFDMMDDVIEPLQLEDAPEWSESEKLAEEKQVLGFYFSGHPFGPFAQ
EVRQFAPVRLNKLKPQDHVRVAGFVTAVRTMMGKRGKIAFATLEDQSGQVEVLVSGQVLE
EYSGRLKADQVLIMECKVSRDDYSGGDALRIMANNVMTLQAAREKYARSLSLSLRPEHDI
PKLADLLGGYRASGSGSIPLYFSYSNDAASGELHTSPQWLVKPDIALFDALQQLLGERAI
RVNW
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctgtttacattcccctgcgcctgcataccgagttttctattaccgacggt
acggtacgtatcaaacaagccgtcaaaaaagcggcagaatacggcttgcccgcattgggt
atcagtgatctgatgaattttttcgggttggtgaaattctataaagcctgccgcggagcg
ggcattaagccgattgcggcggctgatgtttggattgaaaacccagatgcgccggataag
cctttccgagccatgttggtggtgaaaaacgatgcgggttatctgcgcttgagcgagctg
ttgacggccgcctatgtgggtaaagaccgcaatgtcgatcatacggagctgcgccagcag
tggttggctgagggagacaacagcggcttgatttgtttgtcgggcgcgcactatggcgaa
gtaggcatcaatctgatgaacggtcatgaagccaatgccaaagcggccgccaaaaagtat
gccgcgtggtttccggatgctttttaccttgagcttcagcgtctgcccgaacgtccgcaa
tgggaaacatcggtagcgggcagcttggaaattgccgccgaacttgatttgccggtagtc
gccactcaccccacccaatttctcgaggcagatgattttgaagctcatgaggcacgggta
tgtattgctggcggttgggtgctggccgataaaaaacgcccgaaagagttcgtacccggg
caatattttgtttctccggaaacgatggccgagcgttttgccgatttacctgaagccttg
caaaattcggttgagattgccaaacgctgcaacatccacattacattaggtaaaaacttt
ttgccgcaatttcccacgccagacggtatgtcgttggatgactatctgacgctgctttcc
aatgaaggtttgcgcgagcggatggaggtgttgtatcccgatgaggccgagcgtgccgcc
aaaatgcccgagtatcaggagcgtttggattttgaattgcaaatcatcatccagatgggt
tttccgggctatttcctaatcgtacaagacttcatcaactgggcgaaagaaaacggctgt
ccggtagggccggggcgcggttcgggagcaggttcgctagtggcgtacgccctgaaaatt
accgatcttgatccgttgaaatacgcattgctgttcgagcgttttcttaatccggaacgg
gtttccatgcccgacttcgacgtcgatttctgccaaagcaaccgcgggcgtgttatcgaa
tatgtgcgtgaaaaatacggagctgacgcggtcagccaaattgttactttcggtacgatg
tcgtctaaagccgtaatacgagacgtcggccgtgtgttggagctgcctttcggcctgtgc
gataaactttccaaactgattccgcttgaggccaaccgtcccgttagtttggaaaaggcg
atggaacttgagccggaaatcggccagctgattgaaaacgaagatgccgggcagctgatc
gatttggccaaacgcttggaagatttgacccgcggtttgggtatgcatgccggcggtgtg
ttgatcgcaccgggtaagatctctgatttcagccctgtttatcaggcagacgaatcggct
tcgcccgtatctatgtacgataagggcgacgtggaagacgtcggcctggtgaagttcgac
tttttgggtttgcgcaacctgaccatcatcgaaatggcgcaaaactttattgccgaaacc
tgcgggcaaaaggttgatgtcagccatattccgctggatgatccggccacatataaaatc
ttttccacggcaaataccacggcggttttccagtttgaatcgaccggtatgaaaaaaatg
ctgcaaaaggccaagccgaccaagtttgaagagattattgcctttgtatcgctttaccgc
ccgggaccgatggatctgattcccgactttatcgaccggatgcacggtgcgaaattcgaa
tacctgcaccccttgctgagcgaagtgctggaaccgacttacggcattatggtttatcaa
gagcaggtaatgcaggcagcccaggtatgcggtgggtatactttgggtggtgctgatttg
ctgcgccgcgcgatgggtaagaaaaaagtcgaagaaatggtgaaacagcgcgctactttt
gtagccggtgctgcggaaaaaggtatcagccaagccaaagccgatgaaattttcgactat
atggaaaaattcgcaggctacggctttaacaaatcacacgcggcggcttattctttggtg
gcgtatcagacggcttggcttaaagcccattatcccgccgaatttatggcggctaccatg
tcgagcgagttggacaataccgaccagctcaagctgttttacgatgatgcccgcgccaac
ggcatagagtttctaccgcctgatatcaatgaatcgttttaccgttttacgcccaacaac
caacgccaaatccgttatgcactcggtgcggtcaaaggtacgggcgaaggagcggtggag
gcgattgttgcagcgcgcgagagcggcggacgctttaccggattattggacttttgcgaa
cgtgtaggcaaaacacatatcaacaaacgcaccatcgaatcacttatccgcgcgggtgcc
ttcgacagcattgatcctaaccgcgccaaattaatcgccaatatcgatttggctatccac
aatgccgaacaacaggccgccaatgccaatcagggcggactattcgacatgatggacgat
gtcatcgaaccattgcagcttgaggatgcgcccgagtggagcgaatcggaaaaactggcc
gaagaaaaacaagtgttgggcttttatttttccggccatccgttcggcccgtttgcccaa
gaggtacggcagtttgctccggttcgactgaataagctgaaaccgcaagatcatgtgcgt
gtggccggttttgttactgctgtgcgtaccatgatgggcaagcgaggcaaaattgccttt
gccactttggaagatcaaagcggacaagtggaggtattggtaagcgggcaggtgttggaa
gaatattcaggccgtctgaaagccgaccaagtattgattatggaatgcaaagtaagccgt
gatgattacagcggaggcgatgcgttgcggatcatggccaataatgtgatgactttgcag
gctgcccgtgaaaaatacgcccgcagcctcagtttgagcttgcggcctgaacatgatatt
cccaaattggcagatttgctcggcggctatcgggctagcggttcaggctcgataccgttg
tatttcagttatagtaatgatgccgccagcggtgagttacatacttctccgcaatggctg
gttaagcctgatatcgctttgtttgatgctttgcagcagcttttgggtgaacgggcgatt
cgtgttaactggtag
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