Neisseria arctica: LVJ86_03645
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Entry
LVJ86_03645 CDS
T08172
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
naw
Neisseria arctica
Pathway
naw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
naw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LVJ86_03645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
naw03019
]
LVJ86_03645
Enzymes [BR:
naw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LVJ86_03645
Messenger RNA biogenesis [BR:
naw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LVJ86_03645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UOO87354
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All DBs
Position
823151..824560
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AA seq
469 aa
AA seq
DB search
MNHFTTLGLSREITDALAEQGYETPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPS
LERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNTSAYIKNLPLRHTVLFGGVNMDT
QVKDLRSGCEIVVATVGRLLDHVKQKNINLSKVEIVVLDEADRMLDMGFIDDIRSIMQML
PKQRQTLLFSATFAPPIRKLAQDFMKNPEQIEVAAQNTTNANVEQHVIAVDTARKRNLLE
RLIVDLNMNQVIVFCKTKQSVDQVTRDLVRRELAAQAIHGDKSQQTRLETLSAFKEGRLR
VLVATDVAARGLDIAELPFVINYELPTQPEDYVHRIGRTGRAGADGVAISLMDENEQKMF
ESIKELIGLDIAVERIEGFEPRWWDNQENSHAATDNRHNTERSARNQPSERQYNRESHQT
GREERDNKRESRSSERDAGAACGKIAGRSRRSRREQPKCALLQPNFGIR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
ttgaaccactttactacgttgggattgtcccgcgaaattaccgacgcactggccgaacag
ggctatgaaacacccactcctattcaggccgcagccattcccaaagccttggccggacat
gatttgctggctgccgcacaaaccggcacgggtaaaaccgctgcctttatgctgccgagt
ttggagcgtttgaaacgctatgcgacggcaagcacttctcctgcgatgcatcctgtccgt
atgctggtactaacgcccacacgcgagcttgccgaccaaatcgatcaaaatacttcggct
tatattaagaatttgccgttacgccatactgtgttgttcggcggcgtaaatatggatacg
caggtaaaagatttacgatccggttgtgaaatcgtggtcgctaccgtaggccgcctgctc
gaccatgttaaacaaaagaacatcaatttatccaaagtcgaaatcgtagtgttggatgaa
gccgaccgcatgttggatatgggctttatcgatgatatccgcagcattatgcaaatgttg
cccaaacaacggcaaaccctgctgttttcggcaacttttgcaccgcctatccgtaagttg
gcccaagattttatgaaaaatccggagcagatcgaagttgccgcgcaaaacactactaat
gccaatgttgaacagcatgtgattgccgttgatacggctcgcaagcgtaatttattggaa
cgtttgatcgtcgatttgaacatgaatcaagtgatcgtgttttgcaaaaccaagcaaagc
gttgatcaagtaacgcgcgatttggtgcgtcgggagttagccgcccaagcgattcatggc
gacaaatcgcagcaaacccgtttggaaacgctcagtgcctttaaagaaggacgcttgcgt
gtgttggtagcaaccgacgttgctgcccgcggtttggatatcgccgaattaccctttgta
attaactatgagctgccgacacagcctgaagattatgttcaccgtattggtcgtaccggt
cgggcaggggcggatggcgtcgccatttccctgatggatgaaaacgagcagaaaatgttt
gagtcgattaaagaattaatcggtcttgatattgctgtggagcgtattgagggctttgaa
ccgcgttggtgggacaatcaggaaaacagtcatgctgcaacggataaccgccataatacc
gagcggtcggcccgtaaccagccatccgaacgtcagtacaatcgggagtcgcaccaaaca
gggcgtgaagagcgcgataataagcgtgagagccgcagcagtgagcgtgatgcgggtgcc
gcttgcggaaaaattgcaggccgtagccgccgtagccgccgcgagcaacccaagtgtgct
ttgctgcaaccgaatttcggtatacgctga
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