Neisseria arctica: LVJ86_05825
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Entry
LVJ86_05825 CDS
T08172
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
naw
Neisseria arctica
Pathway
naw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
naw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LVJ86_05825 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
naw03021
]
LVJ86_05825 (rho)
03019 Messenger RNA biogenesis [BR:
naw03019
]
LVJ86_05825 (rho)
Transcription machinery [BR:
naw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LVJ86_05825 (rho)
Messenger RNA biogenesis [BR:
naw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LVJ86_05825 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
S1CSD-TOTE-2
AAA
NACHT
AAA_22
Mor
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
UOO85759
LinkDB
All DBs
Position
complement(1278212..1279474)
Genome browser
AA seq
420 aa
AA seq
DB search
MHVSELQTQHISKLLEMAEQHGIENANRLRKQDLVFAIVRQMMKQGESFTCSGTLEILPD
GFGFLRSSDTSYLAGPDDIYVSPNQIRRFNLHTGDTIEGSVRVPKDNERYFALVRLDKIN
GDHPEVCKHKILFENLTPLFPTRQLKLERDIKAEENITSRAIDLVSPIGMGQRALLVAPP
KSGKTVMLQNIAHAITANNPEVELIVLLIDERPEEVTEMTRSVRGEVVSSTFDEPAARHV
QVAEMVIEKAKRMVEHKKDVVILLDSITRLARAYNTVVPASGKILTGGVDANALHRPKRF
FGAARNIEEGGSLTIIATALVETGSRMDDVIFEEFKGTGNMELHLDRRLAEKRVFPAINI
NKSGTRREELLVPNDQLQKMWLLRKFLHPMDDLEATEFLVGKLKDSKDNNDFFELMRGSK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtttccgaattacaaacccagcatatttccaaacttttagaaatggccgagcaa
cacggtattgaaaatgccaaccgcttacgcaaacaagatctggtatttgccattgtgcgc
caaatgatgaagcagggcgaaagttttacctgctcgggtactttggaaattctgcccgac
ggtttcggctttttgcgcagttccgatacttcatatttggccggcccggacgatatttat
gtatcgcccaatcaaatccgccggtttaacctgcatacaggcgacactattgaaggcagt
gtacgtgttccgaaagataacgagcggtattttgctttggtacgccttgataaaatcaat
ggcgaccatcctgaggtttgcaaacacaaaattctgtttgaaaatctgactccgcttttc
ccgacacgccagctcaagctggagcgtgatattaaagccgaagaaaatattaccagccgt
gccatcgatttggtttcgccgattggcatggggcagcgcgctttattggttgctccgccg
aagtcgggtaaaaccgttatgctgcaaaatattgctcatgcgattacagccaataatcct
gaagtggaattgattgttttactgattgacgagcgtcctgaagaagttaccgagatgacc
cgctcagtgcgcggtgaagtggtatcttctacatttgacgaaccggcagcgcgccatgtg
caggtagccgaaatggtgattgaaaaagccaaacgtatggtagagcataagaaagacgta
gtcattttgctcgattcgattacccgtcttgcgcgtgcctacaataccgttgttccggct
tcaggaaaaattctgacaggcggtgttgacgcaaatgccttgcatcgtccgaaacgcttt
tttggcgcagcacggaatatcgaagagggtggctctctaaccattatcgcgactgctttg
gtagaaaccggcagccgtatggatgatgtgattttcgaagagttcaaaggtacgggtaat
atggaactacaccttgatcggcgcttggcggaaaagcgtgtcttccccgctattaatatt
aataagtcgggcacgcgccgtgaagaattattggtgccgaatgatcagttacagaaaatg
tggctgttgcgtaaattcttacatccgatggatgatttggaagctaccgaattcttagtt
ggtaaattgaaagattcaaaagacaacaatgatttctttgaattgatgagaggaagtaaa
taa
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