Neisseria arctica: LVJ86_06335
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Entry
LVJ86_06335 CDS
T08172
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
naw
Neisseria arctica
Pathway
naw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
naw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LVJ86_06335 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naw03400
]
LVJ86_06335 (uvrA)
DNA repair and recombination proteins [BR:
naw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LVJ86_06335 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LVJ86_06335 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_23
nSTAND1
RsgA_GTPase
AAA_21
AAA_25
AAA_22
DnaJ_CXXCXGXG
nSTAND3
cobW
Viral_helicase1
T2SSE
Motif
Other DBs
NCBI-ProteinID:
UOO85858
LinkDB
All DBs
Position
1375329..1378151
Genome browser
AA seq
940 aa
AA seq
DB search
MADNDTIRIRGARTHNLKNIDLDIPRHKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESL
SAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTSHNPRSTVGTVTEIHDYLRLLYARVGT
PHCPEHNLPLSSQTVSQMVDHVLGLPEDTRVMILAPAVRERKGEFADFFADLQAQGFARV
RVDGEVYQLDEVPKLEKNIKHNIDVVIDRVKVKADIKQRLAESFETALRHGNERALALEM
DSGQEHWFSARFACPVCSYSLPELEPRLFSFNNPVGACPTCDGLGSMNFFDPERVVAHPE
LSLAAGAIDGWDKRNQFYFQMIQSLAAHYGFSVDTPFEALPEKVRQTVLHGSGKEVIEFR
YLSEKGTTFNRSHAFEGIIPNLERRYRETDSETIRDKLRDYQSHRACPACGGARLRKEAR
HVFVGGQALHQISATPLKQTLDFFEQLELDGNKKHIAEKILKEITERLGFLINVGLDYLN
LARSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLKRLRDLGN
SVIVVEHDEDAIREADFVIDMGPGAGEHGGTVLIADTPEKVAACEQSVTGQYLSGKKAIT
VPSERTPVDPDRMLVLKGARGNNLKNVTLELPLGLITCITGVSGSGKSTLINDTLAKITA
RELNRAHEEPAPYDEISGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIRDLFAGVPL
SRERGYSVGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRYNRETLEVQY
KGKNISQVLDMTVEEAREFFDTVPTVSRKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKL
ALELSKRDTGRTLYILDEPTTGLHFADIALLLEVIGRLKGKGNSIVIIEHNLDVIKTADY
IVDLGPEGGDGGGRIIAKGDPEEVVKIKESYTGKYLKPIL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaacgacaccatccgcatccgcggcgcacgcacccacaatctgaaaaacatc
gatctcgatattccccgccataaactggtcgtggtaacgggattgtccggcagcggcaaa
tcttcgcttgccttcgatacgctctatgccgaaggccaacgccgctatgtggaaagcctt
tcggcctatgcgcgccaatttttgcagatgatggacaagcccgatgtcgatttgatcgaa
ggcctttcgcccgccatttccatcgaacaaaaatccaccagccacaacccgcgttctacc
gtcggcacggtaacggaaatccacgactacctgcgcctgctctatgcccgcgtcggcaca
ccgcattgccccgaacacaacctaccgctgagcagccaaaccgtatcgcaaatggtcgat
catgttttggggctgcctgaagacacccgcgtcatgatactcgcccccgccgtgcgcgaa
cgcaaaggcgaattcgcggatttttttgccgacctgcaagcgcaaggcttcgcccgcgtg
cgtgtggacggcgaagtttatcagttggacgaagttcccaagctggaaaaaaacatcaaa
cacaatatcgacgtggtgattgaccgcgtcaaggtgaaagccgacattaagcaacgcctg
gccgaaagtttcgaaaccgcattgcgccacggcaacgagcgtgcgttggcattggaaatg
gacagcggccaagaacactggttttccgcccgtttcgcctgccccgtctgttcgtacagc
ctgccagagttggaaccgcgcctgttttcgttcaacaatcccgtaggcgcctgcccgaca
tgcgacggcttgggcagcatgaactttttcgatcccgagcgcgtggtagcccaccccgaa
ttgtctttagccgccggtgccatcgacggctgggacaaacgcaaccagttttatttccag
atgattcaatcgctggccgcgcattacggtttcagcgtcgataccccgtttgaagcgctg
cctgaaaaagtgcgccaaaccgtgttgcacggctccggcaaagaagtgatcgagttccgc
tatctgtccgaaaaaggcaccaccttcaaccgcagccatgctttcgaaggcattattccc
aacctcgaacgccgctaccgcgaaaccgatagcgaaaccatccgcgacaaactgcgcgac
taccaaagccaccgcgcctgccccgcttgcggcggcgcccgtttacgcaaagaagcccgc
catgtttttgtcggcggccaagccctgcaccaaatttccgccactccgctcaagcaaacc
ttggactttttcgagcaactggaattggacggcaacaaaaaacacatcgccgaaaaaatc
ctcaaagaaatcaccgaacgcttgggctttttaatcaatgtcggccttgattacctcaac
cttgcccgcagcgccgaaaccctttccggcggcgaagcgcaacgcatccgcctggccagc
caaatcggcagcggcctaaccggcgtgatgtatgtattggacgaaccctccatcggcctg
caccagcgcgacaacgaccgcctgcttgccaccctcaaacgcctgcgcgatttgggcaac
agcgtcatcgtggtggaacacgacgaagatgccatccgcgaggccgatttcgtgatcgat
atggggcctggcgcgggcgaacacggtggcacggtcttgattgccgacactcccgaaaaa
gtggctgcctgcgagcaatccgttaccggacaatacctcagcggcaaaaaagccattacc
gtgccgtctgaaagaacccctgtcgatcccgacagaatgctggtgctcaaaggcgcacgc
ggcaacaatctgaaaaacgtgacgctggaactgccgctgggtttgattacctgcattacc
ggcgtttcaggcagcggcaaatccaccctgattaacgacacactagcgaaaatcaccgcc
cgcgaactcaaccgcgcccacgaagaacccgcaccctacgacgaaatcagcggattggag
catctcgataaagtcatcaacgtcgatcaatcccccatcggccgcacaccgcgctccaac
cctgcgacctataccggactgttcacccccattcgcgacctctttgccggcgtgccgctg
tcgcgcgaacgcggttacagcgtcggccgcttctcgttcaacgttaaaggcggccgctgc
gaagcctgccagggcgacggcgtgattaaagtggaaatgcactttctgcccgacgtatac
gttccctgcgaagtgtgccacggcaaacgctacaaccgcgaaacgctggaagtgcaatac
aaaggcaaaaacatcagccaagtgctggacatgaccgtagaagaagcgcgcgaattcttt
gacaccgtgcccaccgtatcgcgcaaactgcaaaccctgatggatgtcggcctcggctac
atccgcctcggccaatccgccaccaccctatccggcggcgaagcccaacgcgtcaaactc
gctctcgaactttccaaacgtgacactggccgtaccttgtatattttggacgaacccacc
accggtttgcacttcgccgatattgccttgttattggaagtcataggccgtctgaaaggc
aaaggcaactcgattgtgattatcgagcataatcttgacgtcataaaaaccgctgattat
attgtggatttggggccggaagggggtgacggtggggggaggattattgcgaaaggagat
ccagaagaagtggtaaagattaaggaaagttatactgggaaatatttgaaacctattctg
tag
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