Neisseria arctica: LVJ86_09385
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Entry
LVJ86_09385 CDS
T08172
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
naw
Neisseria arctica
Pathway
naw03030
DNA replication
naw03430
Mismatch repair
naw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
naw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVJ86_09385
03430 Mismatch repair
LVJ86_09385
03440 Homologous recombination
LVJ86_09385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
naw03032
]
LVJ86_09385
03400 DNA repair and recombination proteins [BR:
naw03400
]
LVJ86_09385
Enzymes [BR:
naw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVJ86_09385
DNA replication proteins [BR:
naw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LVJ86_09385
DNA repair and recombination proteins [BR:
naw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LVJ86_09385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
UvrC_M
RNase_H_2
XisAC_2nd
Omega-toxin
Motif
Other DBs
NCBI-ProteinID:
UOO86406
LinkDB
All DBs
Position
2025532..2026923
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AA seq
463 aa
AA seq
DB search
MLSACKWPLLGDFSKKIGLPVAIIDLESTGGDMYQDRITEIAILRFNKGKISRYEWLVNP
QKNIPPFITSLTGISNEMVADAPHFADLVHDLLPLLRGTLLIAHNSRFDYTFLRHEFQRA
GIHFASPALCSVQLSRKLYPQYFKHNLDSIIERFGIQTESRHRAMTDVTALADFLEISLK
EKGCDEWLKHVHTLTNPHPLPHLFSEQLANEIYKLSDSHGVIVWLDAENRAISLSVHKKA
FSEVSALLRRNSYPSEIRNAEKIIFHEALGSLHALQKRVELQKHYQLPASQATQTFFSVE
FTHDEKQRLRAHIRNLENGSYNNPPNGLFLHKKKAKQILSEWAQQQQLCPDSLGLLPTTY
PAGQPCPKIVAGQCNGSCQHQNGIERQNEIITASGRLLPIADWGNAHALEITETDMLSKR
SVTIRCINGVLNLPDGSYYFDSTLPAIVKDIWKRSKHNIRILY
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgctatccgcctgcaaatggccgctattaggggatttttccaaaaagattgggctgcct
gttgccattattgacctagagtctacaggtggtgatatgtatcaagaccgcatcaccgaa
atcgccatcctccgtttcaacaaaggaaaaatcagccgttacgagtggttggtaaatcct
caaaaaaatattcctccctttattacttcacttaccggcatcagcaatgaaatggttgcc
gacgctcctcattttgccgacttagtccatgatttactgccgttactgagggggactctg
ttgattgcacacaacagccgcttcgactatacctttctccgtcatgagttccagcgtgca
ggcatccattttgcctctcctgcattatgcagtgtgcaactatcccgaaaactttaccct
cagtatttcaaacataatttagatagtattattgagcgattcggtatccaaaccgaaagc
aggcaccgcgctatgactgacgtaactgctttggcagattttctagaaatcagcctcaaa
gaaaaaggctgtgatgaatggctcaaacacgtccacactcttaccaatcctcacccgtta
cctcacctattctccgaacagctggcaaatgagatttacaaactatcggacagtcatgga
gtgattgtctggctagatgccgaaaaccgcgccatttccttatccgtacataaaaaagca
ttttctgaagtttctgctttactaaggcgtaacagttacccttccgagatcagaaatgcc
gaaaagatcatttttcatgaagcactcggcagccttcacgctttacaaaaaagagtagag
cttcagaaacattaccaactccctgcctcacaagctacccaaacattttttagtgtagag
tttacccacgatgagaaacagcgtttaagggcacatatccgaaacttagaaaacggcagt
tacaacaatcctcccaatggattgtttctacataaaaaaaaggccaagcaaatattgtcg
gaatgggcacaacaacaacaattatgccccgactctttaggtttgctgcctaccacctac
cctgccgggcagccctgtccgaaaatagtagccggccaatgcaatggcagttgccagcac
caaaacggcattgagcggcaaaacgaaattattactgcatccggccgcttattacccatt
gccgactggggtaatgcccacgcattggaaatcaccgaaacagatatgctatccaagcgt
tccgtgactatacgttgtataaacggagtccttaacttacctgatggcagctattatttt
gattcgacactaccggcaatcgtgaaagatatttggaagcggtcaaagcataatatacgt
atattgtattga
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