Aquisalimonas sp. 2447: HC341_01705
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Entry
HC341_01705 CDS
T06517
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
nax
Aquisalimonas sp. 2447
Pathway
nax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HC341_01705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nax03019
]
HC341_01705
Messenger RNA biogenesis [BR:
nax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HC341_01705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
QIT54043
LinkDB
All DBs
Position
388861..389412
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AA seq
183 aa
AA seq
DB search
MIDSDGFRANVGIILSNEEGRVFWGRRIGQNAWQFPQGGIKRDETPEQALYRELHEEVGL
EPAHVEVIGATAGWLRYHLPRHLVRRHQRPLCIGQKQQWFLLRLVGGESAVRLDASGSPE
FDDWRWVDYWRPARDVVFFKRHVYRRALRELAPLLFPDGAPEQPAHVQGAQGGGRRRRRS
TGA
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtgattgattcggacggcttcagagcgaacgtcggcattatcctcagtaacgaggagggc
cgggtgttctgggggcgtcgtatcggccagaatgcctggcagttcccccaggggggcatc
aagcgcgacgagacgcccgagcaggcattgtaccgcgagctgcacgaggaggtcggcctg
gagccggcgcacgtggaggtgatcggtgccactgcaggctggctgcgctatcacctgccc
cggcacctggtgcggcgccaccagcggcccttatgtattggccagaaacagcagtggttc
ctgctgcggctggtcggtggcgagtccgccgtgcgcctggacgccagcggcagtccggag
ttcgacgactggcgctgggtggattactggcgcccggcccgggacgtggtgttcttcaag
cgtcatgtctaccgcagggccctgcgtgagctggccccgctgctgtttccggacggtgcc
ccggagcagccggcccatgtccagggagcccaggggggcgggcgtcgccggcgccgctcc
accggcgcctga
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