Aquisalimonas sp. 2447: HC341_05025
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Entry
HC341_05025 CDS
T06517
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
nax
Aquisalimonas sp. 2447
Brite
KEGG Orthology (KO) [BR:
nax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nax03032
]
HC341_05025
03036 Chromosome and associated proteins [BR:
nax03036
]
HC341_05025
03400 DNA repair and recombination proteins [BR:
nax03400
]
HC341_05025
DNA replication proteins [BR:
nax03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HC341_05025
Chromosome and associated proteins [BR:
nax03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
HC341_05025
DNA repair and recombination proteins [BR:
nax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
HC341_05025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
QIT54636
LinkDB
All DBs
Position
1090237..1090518
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AA seq
93 aa
AA seq
DB search
MTKSELIEVIATKQQHLAYRDVEVAVKTLLEHMSEALSSGYRIEIRGFGSFSLHHRPPRI
GRNPKTGDPVALPAKYVPHFKPGKELRQRVNGE
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatccgaattaatcgaagtcattgcaaccaaacagcagcatctggcctaccgg
gacgtcgaggtggccgtgaagacgttgcttgagcacatgagtgaggcgttgtcgtcgggg
taccggatcgagatccgtggcttcggcagtttttcgctgcaccaccggccaccacggatc
gggcgcaacccgaaaacgggtgatcccgttgccctgccggcgaagtatgtgccacatttt
aagccggggaaggagttgcggcagcgtgtcaacggcgaatag
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