Aquisalimonas sp. 2447: HC341_09040
Help
Entry
HC341_09040 CDS
T06517
Name
(GenBank) PAS domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nax
Aquisalimonas sp. 2447
Pathway
nax03030
DNA replication
nax03430
Mismatch repair
nax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HC341_09040
03430 Mismatch repair
HC341_09040
03440 Homologous recombination
HC341_09040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nax03032
]
HC341_09040
03400 DNA repair and recombination proteins [BR:
nax03400
]
HC341_09040
Enzymes [BR:
nax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HC341_09040
DNA replication proteins [BR:
nax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HC341_09040
DNA repair and recombination proteins [BR:
nax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HC341_09040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
PAS_4
PAS_8
PAS_10
PAS
PAS_7
PAS_9
DEDDh_C
DUF6114
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QIT55336
LinkDB
All DBs
Position
complement(1916692..1918800)
Genome browser
AA seq
702 aa
AA seq
DB search
MNPRQQVTLVTFALAALSGVIIGGTVYAMAPADAAMGLASAAGVLAAAMMVVAGVLVDRL
IMRPSRKLVRGIRAMLESRSPEQGIAMPRYHALGSLPAATEEFAQALKASRREIRQATEA
ATARVEEQKTWLEVILQSLSEGVVVCNRQQQILLYNNAAVSILGQPEAIGLGRPLFNILS
RAPVEHTLERLERHHANGASAASELTAPFVCSSLDAGQMLHARVALILDNNGAISGHLIT
LVDISDDVALLARGDAIRLALTRELRGVVGNLLAAAETLHGYPDMGPDERRSFDDVILRE
SETLSRRIQELGQEISGQLLGRWPMADVHVSDLASCVQRRLEDTPELQLQLVGMPLWLHG
DSLSLMQMLDCLVRRVHQETAAREFDLEALLADKAVYLDLRWQGAPLSADIIEDWLNTPC
DDEASGQRMREVLERHDCEPWSQTSREAGQALVRLPLPAPNRPQFLPEPERLPARPEFYD
FGLMRKHAGDEELAATPLRELSFVVFDCEMTGLDPMGGDEIISIAGVRVVKHRVLTGETF
ERLVNPGRSIPEDSIRFHGITEDQVQDKPAIQVVLPQFKQFVGDAVMVAHNAAFDMKFIS
LKQEESGVEFDNPLLDTLLLSHMLDGDEEDHSLDALCQRYGITVTGRHTALGDTLATAEL
LVRLIDRLEAKGLDTWGEAMRASNMAAQIRQRSAIVHASMSG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgcgccagcaagtcaccctggtcacctttgcgctcgccgcgctgagcggcgtg
atcatcggcggcacggtctacgccatggcgcccgcggatgccgcgatgggcctcgcctcc
gccgccggggttctggcggcggccatgatggtggtggctggtgtcctcgtggaccggctg
atcatgcgtccgtcccgcaaactcgtccgcggcatccgtgccatgctggagtcccgctcc
ccggagcagggcatcgccatgcctcgctaccatgcgctcggcagcctgccggcggccacc
gaggagttcgcccaggcgctgaaggcttcgcgacgcgagatccgccaggctaccgaagcc
gccaccgcccgcgtggaagagcagaaaacctggctggaagtcatactgcagagcctcagc
gagggcgttgtggtctgcaaccgccagcagcagatcctgctctacaacaacgccgcggtg
tccattctcggccagccggaagccatcggcctgggccgaccactgttcaacattctctcg
cgggcaccggtggaacacaccctggagcgccttgagcgccatcacgccaacggcgcgtct
gccgcctcggaactcacggcacccttcgtctgcagcagcctcgacgccgggcagatgctg
cacgcccgtgtggcgctgatcctggataacaacggcgcgatcagtggtcacctgattacc
ctggtggacatctccgacgacgttgccctgctggcccggggcgacgccatccgactggca
ctgacccgcgagctgcgcggcgtcgtcggcaacctcctggccgcggcggagacgctgcac
ggctacccggacatgggccccgatgaacgacgctcctttgatgacgtcatcctgcgggaa
agcgagaccctgagccgccgcatccaggaactgggacaggagatcagcggccagctgcta
gggcgctggcccatggcggacgtgcacgtcagtgacctggcgagctgcgtccagaggcgg
ctggaggataccccggagctgcagctgcagcttgtgggcatgcccctgtggctgcacggt
gacagcctgtcgctgatgcagatgctggattgcctggtccggcgggttcatcaggagacg
gcagccagggagttcgacctggaggccctgctggcggacaaggccgtgtacctggacctt
cgctggcaaggggcccctttgtccgccgatatcatcgaggactggctgaatacgccctgc
gacgacgaggccagcggccagcgcatgcgcgaggtgctggaacgccacgactgcgagccg
tggagtcagacctcgcgggaggccggccaggcgctcgtacgcttacccctgccggccccc
aaccgccctcagttcctgcccgaaccggaacggctaccagcccgccccgagttctacgac
ttcggcctgatgcgcaagcacgccggcgacgaggaactggcggcaacaccgctacgagaa
ctctccttcgtggtcttcgactgcgagatgacgggactggaccccatgggcggcgacgag
atcatctccatcgccggcgtgcgggtggtcaagcaccgggtgctcacaggtgaaacgttc
gagcgactggtgaacccgggccgttccattccggaggactccatccgcttccatggcatt
accgaggatcaggtccaggacaagcctgccatccaggtcgtgctgccacagttcaagcag
ttcgtcggcgacgcggtgatggtggcccacaacgccgccttcgacatgaagttcatcagt
ctcaagcaggaagaaagcggggtcgagttcgacaatcccctgctggacaccctgctgctg
tcccacatgctggacggcgacgaggaagatcattccctggatgccctgtgccagcgctac
ggcatcaccgtcacgggccgccacaccgcgctgggcgacacgctggccactgctgaactg
ctggtgcggctcatcgaccggctggaggccaaggggctggacacctggggtgaagccatg
cgcgcatcgaacatggccgcgcagatccggcagcgctcggccatcgtgcacgcttccatg
tcagggtaa
DBGET
integrated database retrieval system
