Aquisalimonas sp. 2447: HC341_09385
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Entry
HC341_09385 CDS
T06517
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nax
Aquisalimonas sp. 2447
Pathway
nax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HC341_09385 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nax03019
]
HC341_09385 (recQ)
03400 DNA repair and recombination proteins [BR:
nax03400
]
HC341_09385 (recQ)
Enzymes [BR:
nax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HC341_09385 (recQ)
Messenger RNA biogenesis [BR:
nax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HC341_09385 (recQ)
DNA repair and recombination proteins [BR:
nax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HC341_09385 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
QIT55401
UniProt:
A0A6H0IVV9
LinkDB
All DBs
Position
1991283..1993121
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AA seq
612 aa
AA seq
DB search
MINTPDPAREMHRDPGQILHSVFGFEHFRPLQRQVVEQVMGGGDALVLMPTGGGKSLCYQ
IPAIARPGTGIIVSPLIALMNDQVAALVQSGVNAACLHSGLEAGEARAIEQALVEGELDL
LYVAPERLLTPRMRDLLQRVRPALFAIDEAHCVSQWGHDFRPEYLQLAVLGRDWPEVPRL
ALTATADPRTREEILERLDMPRAERFISSFDRPNIRYRVAEKRNAKQQLKNFLEREQGGN
AGIVYCLSRRKVDDMAAWLRDQGWQALPYHAGLSAEERRRNQERFVGGDGVIVVATIAFG
MGIDKPDVRFVAHMDLPRSLEAYYQETGRAGRDGLPADAWMVYGLQDVITLRQMIEGSGA
DPERQRVERQKLEDMLAFCEQLNCRRQILLAHFGEQDHPACGNCDTCLEPPESWDATEAA
RKALSCVWRTGQRFGVSHLVSVLQGTDSERIRELGHHHLSTWGIGDDMGTGEWRAIFRQL
VARGLLTVDAEGYGSLRLTEACRPVLRGEQSLTLRRDRKPARTGRRQRQPGEGLMDGASH
ALWEALRECRRRLAAEQGLPPYMIFHDSTLMDMVAARPETHEALAAINGVGEHKLQRYGD
DFLEAIRSVVTS
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgattaacacgccagaccctgcaagggaaatgcacagggatcccgggcagattctccat
agcgtattcggtttcgagcatttccggccgctccagagacaggttgtcgagcaggtcatg
ggtggcggcgacgccctggtgctcatgcccaccggcggcggcaagtcgctgtgctaccag
attcccgccattgcgcggccggggaccgggatcatcgtatcgcccttgattgcgctgatg
aacgaccaggtggccgccctggtgcaaagcggcgttaatgcggcgtgcctgcactccggc
ctggaagcgggtgaagccagggccatcgagcaagcgctggtggagggggagctggatctt
ctctatgtagccccggagcggctgcttacgccgcggatgcgggatctgctgcagcgggtc
cgcccggcgttgtttgccatagacgaggcgcactgtgtctcccaatgggggcacgatttc
cgcccggagtatctgcagctggcggtgctgggccgggactggccggaggtgccgcgtctg
gcgctcaccgccaccgctgatccacgcacccgggaggagatcctggagcgattggacatg
ccgcgggcggagcgtttcatctccagcttcgatcgcccgaacatccgctaccgggttgcg
gagaaacgcaatgccaagcagcaactgaagaatttcctggaacgggagcagggcggtaac
gcgggtattgtctattgtctgtcacggcggaaggtcgatgacatggctgcatggctgcgg
gatcagggctggcaggcactgccgtaccatgccgggctgtcggcggaggagcgccgccgc
aaccaggaacggttcgtgggcggcgacggcgtcatcgtggtggccaccatcgccttcggc
atgggcatcgacaaacccgacgtgcgctttgttgcccacatggacttgccccgcagcctg
gaggcctattaccaggaaaccggccgtgccggccgtgatggactgccggcggatgcctgg
atggtctacggattgcaggacgtgatcaccctcaggcagatgatcgagggttccggcgcg
gacccggagcgccagcgggtggagcggcagaagctggaggacatgctggccttctgcgag
cagctcaactgccgtcggcagattctgctggcacacttcggggagcaggatcacccggcc
tgcggcaactgtgatacctgcctggagccgccggagagctgggatgccaccgaggcggcc
cgcaaggcgctgtcctgtgtctggcggactggtcagcggttcggggtaagccatctggtg
agcgtgctccagggcaccgacagtgagcgcatccgcgaacttgggcaccatcacctcagc
acctggggaatcggcgacgacatggggaccggagaatggcgggcgatcttccgccagctg
gtggcgcgcggcctgctcaccgtggacgcggagggctatggcagccttcgcctgactgag
gcttgtcggccggtactgcggggcgaacagtcactgaccctgcgtcgtgaccgcaagccg
gcccgcaccgggcgacgccagcgccagcccggcgaagggttgatggatggcgccagccat
gccctgtgggaggcgctgcgggaatgtcggcggaggcttgcggcggagcagggcctgccc
ccgtacatgatctttcacgacagcacactcatggacatggtcgctgcgcgaccggagacc
cacgaggcgctggcggccatcaatggcgtcggcgaacacaagctgcagcgctacggtgat
gacttcctggaggccatccgcagcgtcgtcacgagctga
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