Aquisalimonas sp. 2447: HC341_09650
Help
Entry
HC341_09650 CDS
T06517
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
nax
Aquisalimonas sp. 2447
Brite
KEGG Orthology (KO) [BR:
nax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nax03019
]
HC341_09650 (hrpA)
Enzymes [BR:
nax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HC341_09650 (hrpA)
Messenger RNA biogenesis [BR:
nax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HC341_09650 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
NACHT
nSTAND3
T2SSE
NAD_binding_10
SLFN-g3_helicase
ABC_tran
AAA_24
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QIT55451
UniProt:
A0A6H0IW09
LinkDB
All DBs
Position
2049753..2053655
Genome browser
AA seq
1300 aa
AA seq
DB search
MAGGAEQQDTPTLQGVREQLGQAMGADRRAFRKRLRGLERRARDGKPFDRGLTRLGRDVQ
RSVVRRARRLERLPTPDYPADLPVTDHRDTIAEAIRDHQVVVVCGETGSGKSTQLPKICL
DLGRGIDGMIAHTQPRRLAARTLANRVAEELRTEVGDAVGYKIRFSDHVSDDTFIKLVTD
GMLLAEIQGDRELDGYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDPE
RFARHFDDAPVVHVSGRSYPVDVRYRPLAADDEDSRDRDQQTAIIDAVDELAREGPGDIL
VFLATEREIRETAEALRKQHPPGTEILPLFARLSAAEQQRAFRSHQGRRIVLATNVAETS
VTVPGIRYVVDTGRVRLSRYSFRSKVQRLPIEPISRASADQRAGRCGRVAPGICVRLYSE
EDYQSRPEFTDPEIQRTNLAAVILQMQALGLGAVEEFPFVEPPDRRYINDGYRGLFELQA
VDAERRLTELGRRLARLPVDPTIGRMLLAAGEIGALDELLIIAAGLSIPDPRERPMEAQQ
AADQAHREWRDEASDFLAFVNLWRDYQHNRRHLTRRKLDRWCRERYLSPMRMREWADIHR
QLKELATAQGFRLNSEAADYKPLHRALLTGLLGNVAMRNDEQTYLGARELKLTIFPGSAL
SRRRPKWIVCAELVETSRVFARTVAAVDPREVEAVAGHLVQRSYNEPHWDPRRGRVSAFE
TVTLYGLPLVTGRRVDYGRIAPEEAREILIRQGLAEDRVDSPGRFREHNRNLIAEVQALE
EKSRRRDVLVESDRIRDFYAERIPAEVVDLKGFERWRKQVEQQHPRRLYMTRDALMQHQA
EDVTGARYPETLRVGELQLPLAYHFEPGHADDGVSLQVPLAALNQLEPEPLEWLVPGLLE
EKVTALIRGLPKTLRRNFVPAPDFARAALDAVPAGKGSLVDALRRQLHRMTGVDVPPEQW
DAVALPEHLRMNIQVLDAGGVLVERGRDLRALQRQLGEHASAEFRTATPDPEWEREGLTR
WDFGDLPEVVEFQRQGVSVRGYPAVVDEGSSVALRICDAPETAVMRSRAGVRRLIRLHLR
EPIQHLRDNLPDFQRMSLQYQGIGSSDELRDELIGAVVDRLFLSGAALPRSETAFRELLE
TGRGELVEEGERFARRVARILGRYHALRKALKQPRGLDGMDSFRDMNDHLDHLVFPHFLL
ELPPALLESLPRYLDGLEHRVEKQAEDPRRDAQRTHLVRPWWEAWQQRAERHRQEGIHDP
ELATMRQLLEEYRVSLFAQHLGTAMPASEKRLRQQWQQVR
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggcgctgaacagcaggacacgccgaccctccagggtgtgcgcgaacagctg
ggccaggccatgggcgccgaccggcgggctttccgcaagcggttgcgtggcctggagcgc
cgcgcccgcgacggcaagccgtttgatcgcgggctgacgcgtctcggtcgagacgtccag
cgttccgttgtccgccgcgcacgacggctggaacgcctgccgacgcccgattatcccgcc
gatctgccggtcaccgaccaccgggacaccattgccgaggccattcgcgaccatcaggtg
gtggtggtctgcggcgagaccggctccggcaagagcacccagttgccgaagatctgcctg
gacctcggccgcggcatcgacggcatgatcgcccacactcagccgcgccgcctggccgcg
cgcaccctggccaatcgtgtcgccgaggagttgcgcaccgaggtgggcgatgcggtgggt
tacaagatccgcttctccgaccacgtcagtgacgacaccttcatcaagctggtcaccgac
ggcatgctgcttgccgagatccagggtgatcgcgagctggacggctacgacaccatcatc
atcgacgaggcgcacgagcgcagcctcaacatcgatttcctgctggggtatctcaagcag
ctcctgccgcgccggcccgatctgaaggtgatcatcacgtcggcgaccatcgaccccgaa
cggtttgcgcgacacttcgacgatgcgcccgttgtccacgtctccgggcgcagctacccg
gtggacgtgcgttaccgcccactggccgcagacgacgaagacagccgcgaccgcgaccag
cagaccgcgatcatcgacgccgtggacgaactcgcccgcgaggggcccggggacatcctg
gtgtttctggccaccgagcgggagatccgggagacggcggaggcgctgcgcaagcagcat
ccacccgggacggagattctgccgctgttcgcccggctcagcgccgcggaacagcagcgc
gcgttccggtcccaccaggggcgacgcatcgtgctggccaccaacgtggcggagacatcc
gtgaccgtgccgggcatccgctacgtggtagacaccggccgcgtgcggctgagccgctac
agcttccgcagcaaggtccagcgcctgcccattgaaccgatctcccgcgcctccgccgat
cagcgtgcgggccgctgcgggcgggtcgcgccaggcatctgcgtgcggctgtacagcgaa
gaggactaccagtcccgtccggaattcaccgacccggaaatccagcgcaccaacctggca
gcggtgatcctgcagatgcaggccctgggcctgggcgccgtggaggagtttccgttcgtg
gagcccccggaccggcgctacatcaatgacggctaccgtggcctgttcgagctgcaggcg
gtggacgccgagcgccggctcacggagttgggccggcgcctggcgcgtctgccggtggac
cccaccatcggtcgcatgctgctggcggccggcgagatcggagcgctggacgaactgctg
atcatcgccgccggcctgagcattcccgatcctcgcgagcgccccatggaggcgcagcag
gctgccgatcaggcgcaccgtgaatggcgcgatgaagcttcggattttctcgccttcgtg
aacctgtggcgggactaccagcacaaccgccggcatctgacccgccgcaagctggaccgc
tggtgccgcgagcgctacctgagcccgatgcgcatgcgcgagtgggcggacattcatcgc
cagctcaaggagctggccacggcgcagggattccggctcaacagtgaggcggcggactac
aaaccgttgcatcgggcgctgctcacggggctgctgggcaacgtggccatgcgcaatgat
gaacagacctacctgggtgcccgggagctgaagctcaccatcttccccggctctgcgctc
agcaggcgtcgacccaagtggatcgtttgtgcggaactggtggagacctccagggtcttt
gcccgcaccgttgccgccgtggatccgcgggaggtggaagccgttgccggccacctcgtc
cagcgcagctacaacgaaccccattgggatcctcgacggggacgcgtcagcgcctttgaa
accgtcaccctttatgggctgccgctggtcacggggcggcgggtggactacggccgcatc
gccccggaagaagcccgggagatcctcatccgccaggggctggccgaggaccgggtggac
agccccggacggttccgtgaacacaaccgcaacctgatcgccgaggttcaggcgctggag
gagaagtcccggcgccgcgacgttctggtggagagcgaccgcattcgcgatttctacgcc
gagcgcatcccggcagaggtggtcgacctcaagggcttcgagcgctggcgcaagcaggtc
gagcaacagcacccccggcgcttgtacatgacccgtgatgcgctgatgcagcaccaggcg
gaggacgtcaccggcgcccgctatccggagaccctgcgcgtgggcgagttgcagctgccg
cttgcctaccatttcgagccgggacatgccgacgacggtgtctcgctgcaggtgccgctg
gccgctctcaatcaactggagccggaaccgttggaatggctggttcccgggctactggag
gagaaggtcaccgctctgatccgcggcctacccaaaaccctgcgccggaacttcgtgccg
gcaccggatttcgcccgggccgcgctggatgccgtgcccgccgggaaggggtcgctggtt
gacgccctgcgccgtcagctccatcgaatgaccggagtggacgtacccccggagcagtgg
gatgccgtggcactgccggagcacctgcgcatgaacattcaggtgctggacgccggtggt
gtgctggtggagcgagggcgcgatctgcgtgcactgcaacgccagctcggcgagcacgcc
agcgccgaattccgcaccgccacgccggatccggagtgggagcgtgaaggtcttacccgc
tgggatttcggcgacctgcccgaggtggttgagttccagcggcaaggggtgagcgtacgc
ggctatcccgccgtggtggatgagggcagcagcgtggcactgcgtatctgcgatgcaccg
gagactgcggtgatgcgcagccgcgccggtgtgcgtcggctgatccgcctgcatctccgc
gagccgatccagcatcttcgggacaacctgccagattttcagcgtatgagcctgcagtac
cagggaattggcagcagcgacgagttgcgggacgaactcatcggcgcggtggtggaccgg
ctgttcctgagcggggccgctctgccccgcagcgagacagccttccgcgaactcctggag
actggtcgcggtgagctggtggaggagggggagcgtttcgcccggcgggtggcccgcatc
ctggggcggtatcacgccctgcgcaaggcgctgaaacagccccggggcctggacggcatg
gacagcttccgggacatgaacgaccacctggatcacctggtcttcccgcactttctgctg
gagctgccaccggcgttgctggagtcgctgccacgctacctggacggcctggagcaccgg
gtggagaaacaggcagaggatcctcgccgcgacgcccagcggacccacctggtgcgcccc
tggtgggaggcatggcaacagcgcgccgagcgccatcgccaggagggcattcacgacccg
gaactggccaccatgcgtcagcttctggaggaataccgcgtctccctgttcgcccagcat
ctggggaccgccatgccggcctccgagaagcgcctgcgtcagcagtggcagcaggtgcgg
tag
DBGET
integrated database retrieval system
