Aquisalimonas sp. 2447: HC341_14565 Help Entry HC341_14565       CDS       T06517                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism nax  Aquisalimonas sp. 2447 Pathway nax02020   Two-component system nax02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:nax00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     HC341_14565  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     HC341_14565  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:nax03021]     HC341_14565 Transcription machinery [BR:nax03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      HC341_14565 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID IL7 Motif Other DBs NCBI-ProteinID:  QIT56313 LinkDB All DBs Position 3092115..3093698 Genome browser AA seq 527 aa AA seqDB search MKQSLQLKLGQQLTMTPQLQQAIKLLQLSTLELRTEIQQALDSNLMLEPADDLDESDDAE LDSSGNADGEDSQNNAEDGGERTEAAENREHAESTEAAASEATGAEITTDSGEPELSTEN QQSDIPEDLPLDSDWNDIYDGSTSYSAAGSDDEQRETWENRTAGDGGGLHEHLLWQAQLS HFSDRDMAIAEAIIDGVRDDGYLGVSIEDICASVSSDEPVEADEVEAVRHLIQRFDPVGV ASLDPREALLVQLDQFPDDTPWLNEARLLVDRHLDLLGSRQVSQLTRKLKISEGELGEVL ALVRSLDPRPGSQISSAPAEYVIPDVYVRKERGAWRVELNPEAAPKIRVNSYYAGLVKRG DQGSDNSTMRQHLQEARWFIKSLQSRNETLLKVATCIVNHQQEFLEHGEESMKPLVLREV AEEVEMHESTISRITTQKYMYTPRGTFEFKYFFSSHVHTVDGDECSATAIRARIRRLIGD EDPRKPLSDSKLAEILKNEGIDVARRTVAKYRESMSIASSNDRKRIA NT seq 1584 nt NT seq  +upstreamnt  +downstreamnt atgaaacagtcgctacaactcaagctcggacagcagctcaccatgaccccccaactgcag caggccatcaagctgctgcagctctccacgcttgagctacgcacggaaatccagcaggcg ctggactccaacctgatgctggaacccgccgacgatctcgacgagtccgacgatgccgaa ctcgacagcagcggcaacgcggacggcgaagacagccagaacaacgccgaagacggcggc gagcgcacggaggctgccgagaaccgggagcatgcggagtccacagaggctgccgcaagc gaggctaccggcgcggagataaccaccgacagcggcgaaccggagctgagcacggaaaac cagcagagcgatatccccgaagacctgccgctggactccgactggaacgacatctacgac ggcagcacctcgtacagtgccgccggcagcgacgatgaacagcgggaaacctgggaaaac cgtaccgccggtgacggtggtggcctccacgagcacctgttgtggcaggcccagctctcc catttcagtgatcgcgacatggccattgccgaggccatcatcgacggcgtccgcgacgac ggttatctcggcgtcagcatcgaggacatctgcgcctcggtgtcttcggacgagccggtg gaggccgatgaagtcgaggcggtgcgccacctgatccagcgcttcgacccggtcggcgtg gcctctttggacccccgcgaggcgctactggtccagctggaccagtttcccgacgacacg ccctggctgaacgaagcacggctgctcgtggaccgccacctggatctgctcggcagccgt caggtcagccagctgacccgcaaactgaagatcagcgagggcgagctgggcgaggtgctg gccctggttcgctcgcttgacccgcgccccggctcgcagatcagtagcgcaccggctgag tacgtcatccccgacgtctatgtgcgcaaggagcgtggtgcctggcgggtcgagctcaac cccgaagccgcccccaagatccgggtgaacagctactacgccgggctggtgaagcgcggc gaccagggcagcgacaactccaccatgcgccagcacctgcaggaggcccgctggttcatc aagagtctacagagccgcaacgagaccctgctcaaggtcgccacctgcatcgtcaaccac cagcaggagttcctggagcacggcgaagagtccatgaaacctctggtgctgcgggaggtg gccgaagaggtggaaatgcacgaatccaccatctcgcgcatcaccacccagaagtacatg tacaccccgcggggcaccttcgagttcaagtatttcttctccagccatgtgcacaccgtc gacggtgacgagtgctcggcgaccgccatccgtgcgcgcattcgccgcctgatcggcgac gaggatccgcgcaagccgctcagcgacagcaaacttgcggagattctcaaaaacgaggga atcgatgtggcgcgacggaccgtagccaagtatcgtgaatccatgtccattgcctcgtcc aacgacaggaaacgcatcgcctga

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