Aquisalimonas sp. 2447: HC341_18605
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Entry
HC341_18605 CDS
T06517
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nax
Aquisalimonas sp. 2447
Pathway
nax03420
Nucleotide excision repair
nax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HC341_18605 (uvrD)
03430 Mismatch repair
HC341_18605 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nax03400
]
HC341_18605 (uvrD)
Enzymes [BR:
nax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HC341_18605 (uvrD)
DNA repair and recombination proteins [BR:
nax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HC341_18605 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HC341_18605 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QIT57031
UniProt:
A0A6H0J0I6
LinkDB
All DBs
Position
complement(3948570..3950744)
Genome browser
AA seq
724 aa
AA seq
DB search
MDVSDILDPLNDAQREAVSVPLGHNLVLAGAGSGKTRVLVHRAAWLGRVENAPPYSILAV
TFTNKAAAEMRGRIERLLGYSAAGMWTGTFHGLAHRLLRRHWREAGLTETFQILDAEDQR
RQVKRVMRLLEIDESRFPVRQVQGYINARKDDGHRPADLGTGGDPYTERLVRIYAAYQEA
CDRNGQVDFAELLLRSFELLRDHPGLLAHYRGQLRHFLVDEFQDTNGIQYAWLRQLAGND
ADLFVVGDDDQSIYGWRGARVENIRRLSDDYPGMKVMRLEQNYRSTETILTAANTLIAHN
SGRMGKNLWTDGAEGDPVAIYAAFNELDEARYVVERIVEQIENQGLARSDMAILYRSNAQ
SRVFEEALLTRGLPYRVYGGLRFFERAEIKDALAYLRLLDNRDDDPSFERVVNTPARGIG
GKTVDTLREQARARGVSLWAAARAAIADRSLPGRAATSVTRFLALIDALGEEAAEQPLAE
QIDVVVRGSGLRELFQKDSSDRGESRLENLDELINAARHFEQEWEGDEDMDVLTAFLSHA
ALEAGEGQADAWEDCVQLMTLHSAKGLEYPVVFLTGLEEGLFPHRMSAEDPDRLEEERRL
CYVGLTRARQHAVMTWAEKRRLHGSETFGAPSRFLAELPEHCVQHVRTRMNVSRPQMAVR
AGLGEPMAPQEAAFSLGQRVHHPKFGDGIVLQYEGQGPSARVQVNFTDAGTKWLVAAYAK
LDSA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatccgacattctcgatcccttgaacgacgcccagcgcgaggccgtgagtgtc
cccttgggccacaatctggtgctggccggggccggcagcggcaagacccgggtgctggtg
catcgtgccgcctggctgggccgggtggaaaatgccccgccctacagcatcctcgcggtg
accttcaccaacaaggcggcggcagagatgcgcggccgcatcgaacggctgttgggctac
tccgccgccggcatgtggaccggtaccttccacggtctcgcccaccgtctgctgcgccgt
cactggcgggaggcggggctcacggagaccttccagatcctggacgccgaagaccagcgc
cgacaggtgaagcgggtcatgcggctgctggaaatcgacgaaagccgtttcccggtgcgc
caggtgcagggctacatcaatgcccgcaaggacgacggccaccggcccgcggacctcggc
actggcggcgacccctataccgagcgcctggtgcgcatctatgcggcctaccaggaggcc
tgcgatcgcaatggccaggtggattttgccgagctgctgctgcgcagtttcgagctgctg
cgggatcacccgggactgctcgcccactaccgcgggcagctccggcacttcctggtggat
gagttccaggataccaacggcatccagtacgcctggctgcgtcagctcgccggcaacgac
gccgacctgttcgtggtcggggatgacgatcagtccatctacggctggcggggggcccgg
gtggagaacatccgccggctcagcgacgactacccgggcatgaaggtgatgcgcctggaa
cagaactaccgttccacggaaaccattctcaccgccgccaacaccctgatcgcccacaac
agcgggcgcatgggcaagaacctgtggaccgacggcgccgagggcgacccggtggccatc
tacgctgccttcaacgaactggacgaggcgcgctacgtggtggagcgcattgtcgaacag
atcgagaaccaggggctggcgcgcagcgacatggccattctctaccgctccaatgcccag
tcccgggtgttcgaggaggcgctgctcacccgcggcctaccctaccgcgtctatggcggg
ctgcgcttcttcgagcgcgccgaaatcaaggatgccctggcctacctgcggctgctggac
aaccgtgatgacgacccctcgttcgagcgggtggtgaatacccccgcccgcggcatcggc
ggcaagaccgtggataccctgcgtgagcaagcccgtgcccgcggcgtgagcctctgggcc
gccgcccgggcggccattgccgatcgtagcctgccgggccgtgcggcgacgtcggtgacc
cgctttctggcgctcatcgatgccctgggcgaggaggccgcggagcagcccctggcggaa
cagatcgacgtggtggttcgcggttccggcttgcgcgagctgttccagaaggacagcagc
gaccgtggcgagtcgcgcctggagaacctggacgaactgatcaacgccgcccgccacttc
gagcaggagtgggagggcgacgaggacatggacgtgctcaccgcattcctgtcccatgcc
gccctggaggccggcgagggccaggcggacgcctgggaggactgcgtccagctcatgacc
ctgcactctgccaagggactcgagtacccggtggtgtttctcaccggccttgaggaaggc
ctgtttccccaccgcatgtccgccgaggacccggaccgtctcgaggaggagcggcggttg
tgttatgtcggcctcacccgggcacgccagcacgccgtcatgacctgggccgagaaacgt
cgcctgcacggctccgagaccttcggcgcgccgtcacggtttctcgccgagctgccggag
cactgcgtgcagcacgtgcgcacccgcatgaacgtctctcgcccgcagatggccgtgcgt
gccgggctgggggaacccatggcgccccaggaggcggctttcagtctggggcagcgggtt
caccacccgaagttcggcgacggcatcgtgctgcagtacgagggccaggggcccagtgcc
cgggtgcaggtgaacttcaccgacgccggcaccaaatggctggtggcggcctacgccaag
ctggacagcgcatag
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