Natrinema zhouii: HYG81_01770
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Entry
HYG81_01770 CDS
T08017
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
nay
Natrinema zhouii
Pathway
nay03022
Basal transcription factors
nay03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nay00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HYG81_01770
09124 Replication and repair
03420 Nucleotide excision repair
HYG81_01770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nay03021
]
HYG81_01770
03400 DNA repair and recombination proteins [BR:
nay03400
]
HYG81_01770
Enzymes [BR:
nay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYG81_01770
Transcription machinery [BR:
nay03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HYG81_01770
DNA repair and recombination proteins [BR:
nay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HYG81_01770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
ERCC3_RAD25_C
Helicase_C
DEAD
SNF2-rel_dom
SWI2_SNF2
SoFic-like_C
HTH_Crp_2
AAA_30
AAA_11
DUF7342
HTH_36
AAA
Motif
Other DBs
NCBI-ProteinID:
QLK26373
UniProt:
A0A7D6CRW3
LinkDB
All DBs
Position
complement(343772..345718)
Genome browser
AA seq
648 aa
AA seq
DB search
MSNRIQFTIDEVKDAVEEIHEVRPFVTTKAISKIIGCSRETARVKLTQLVSQGVLKSQRV
GGRAKVWYSPQWVSSQQYDSASSKKAVVENARGESNRGGTPQNSRHHVLESKEDERVFFF
PSRREVVVGSPTDRSQQILAQTSHLVDSTGKGYLYKIDETDIWNAPYDSFSDLRDDLIRL
IGEEQWDGGFESRVEDDWDRAHQFRLRTHQDGYSVLQAKDVDVFENVAKRKLEYGSHYSE
FLSEIEMRVTNGEESSIKETLYDAGYPVIDERKLEEGASLEISLSGDIKLRDYQSKWVNH
FAERQSGVFVGPPGSGKTIAALGAIEVIGGETLIIVPNRELAQQWEDEIVQKTTLAPQKV
GQYHGGTKQIRPVTIATYDTASMSRHRELFNERDWGLVIADECHHSVASTWKRFREIQSK
ARLGLSATPVREADDPKEIYTLIGPPIGTDWGSLFADGWVEKPDVELITVPWASSKIRER
YQRASGSKRLIEAARNPKKQQVINSILKEHPGQKKLIFVDWIKQGKELAEELNLPFIYGE
TNHVKREEIYDRFRQGTIDALIISRVGDEGIDLPDAEVAIIASTMGSSRSQTGQRAGRTM
RPLGDANVYIILTEGSGEEDWGRESTQYLAEKGIDVRKTDWQNINPTP
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatagaatacaattcaccatcgacgaagtaaaagatgcggtggaagagatacat
gaggttcgacctttcgtcactaccaaggctatctctaaaataattggctgctcgcgtgag
actgcacgggtaaaactcacacaattagtcagtcaaggggtcctgaagtctcaacgggtg
ggtggacgagcaaaagtttggtactctcctcaatgggtcagctcacagcaatacgatagt
gcctcttcgaagaaggcagtagttgaaaatgcaaggggggagagcaaccgaggtggcaca
ccccaaaattcaagacatcacgttctggaaagcaaagaggatgagagagtctttttcttt
ccaagtcggcgtgaagtagtcgtaggttcaccaaccgatagaagccaacagattttagct
caaacatctcatttggttgattcaaccggaaagggatatctttacaagattgatgagact
gacatctggaacgctccctatgattcattttctgatctccgcgacgacctaattaggctt
attggagaggagcaatgggatggaggattcgaaagtcgggttgaagatgattgggatcga
gctcatcaatttcgtcttcgaacccatcaagatggctactcggtccttcaagcgaaggac
gtagatgtctttgagaatgttgcaaaaaggaaattagagtacggatctcattattccgag
tttctttctgaaatcgaaatgagggttacaaatggggaggagtctagtataaaagaaact
ctttacgatgctggatatccggttatcgatgaacgaaaacttgaggaaggtgcctcactc
gagatctcgctgtctggggatatcaaactccgagactatcaaagtaaatgggtcaatcac
tttgcagaacggcaatctggcgttttcgtgggaccaccagggagtggaaaaaccatagcc
gcactaggtgcaatagaagtgatcggaggagagacactcatcattgtccctaaccgtgag
ctagctcagcagtgggaagatgaaatagtacagaagacaacccttgcaccccaaaaagtt
ggacagtaccatggtggtacaaagcaaattcgtccagttaccattgcaacatatgataca
gcatcgatgagtcgtcacagagaactattcaatgaacgtgattggggacttgtaattgct
gacgagtgtcatcattcagtagcctcaacttggaagcggtttcgtgagattcaatcgaaa
gcgcgtcttggattgtctgcaactcctgttcgagaggctgacgatccaaaggaaatctat
actctcatcgggcctccaattggtacagactggggttcactatttgctgatggctgggtt
gagaaacctgatgtcgaactcatcacagtgccatgggcaagtagcaagatacgcgaacga
tatcagcgtgcctcaggaagtaaacgtcttatcgaagccgctcgaaacccaaagaaacag
caagttatcaattctatccttaaagaacaccctgggcaaaagaaactcatattcgttgac
tggattaagcaagggaaagaacttgcagaagaactcaatttgccatttatatatggtgag
accaatcacgtcaaacgagaggagatatatgaccgtttccgccaagggacgattgatgcg
ttaattatctcacgagtcggtgatgaggggattgatcttcctgatgccgaggtggctata
atcgcatcgacaatgggatcctctcgctcacaaacggggcaacgagcaggccgaacaatg
cgaccattaggagatgcgaatgtatatattattctcactgaaggctcaggcgaagaagac
tggggtcgcgagagtacacagtacctagctgagaaggggatagatgtgaggaaaactgat
tggcagaatatcaatcccaccccttag
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