KEGG   Natrinema zhouii: HYG81_06540
Entry
HYG81_06540       CDS       T08017                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
nay  Natrinema zhouii
Brite
KEGG Orthology (KO) [BR:nay00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nay03400]
    HYG81_06540
Enzymes [BR:nay01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HYG81_06540
    5.6.2.6  RNA 3'-5' helicase
     HYG81_06540
DNA repair and recombination proteins [BR:nay03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HYG81_06540
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WH_Lhr ResIII AAA_25 HypA Zn_ribbon_8 DUF116
Other DBs
NCBI-ProteinID: QLK27256
UniProt: A0A7D6CR92
LinkDB
Position
complement(1331835..1334726)
AA seq 963 aa
MTDGDVAAFTRLGSTVRGALSERGFSQPTAPQRLAIPPLSAGENTLVIAPTGSGKTETAM
LPVFDHLVAGDGEPSTARRSSSAETSDGGPPEGFGALYITPLRALNRDMRERLEWWGDYL
DLEVDVRHGDTTQYQRGKQAENPPDVLVTTPETVQAMLTGKRLREALEDVSHVVIDEVHE
LAASKRGAQLAIGLERLRDLAGPFQRIGLSATVGDPGEVGQFLTGGRPCEIREIDVGSNV
DVTVREPAVTEEDERLAGELMTEADTASHVRLIRDLVEKHESTLIFVNTRQTAEALGSRF
KELDLPIGVHHGSLSKEARIDVEDRFKAGGIDGLLCTSSMELGIDVGQVDHVIQYKSPRQ
VTRLLQRIGRAGHRQDEVSSGTIVTTRPDDTFEALSIARRARDGEVEPAAIHEGSLDVVA
NQLPAIVQSRGDTYVDEAVETVTRAYPFRTVPEATVREIISELHRNRILWFDEAEDRIET
TGGTWQYVYANLSMIPDEETYEVHDIASGGQIGTLDERFVVNFAQPGEVFIQRGEMWRIA
EIDDEEARVKVSPIEDPAGEVPSWIGQEIPVPAAVAGEVGEIRAVAEPQLEAGADAAAVG
RELAGRYPSDEYTLTEACTQLEQQIDADAPMPTADRLVLERQGRTIVLNAPFGHTANETL
GRILSALLGQRAGSSVGLETDPYRIELEVPNSIATSDVLAVLEETDPDHVEAIVELGLKR
SDALAFRLAQVSAKFGALKRWQNRGSGRISNDRLLAALEDTPMYEEAIREVFHEDLDVER
ASSVLAGIQSGDLELVTHRGRTPIGLGGRSSGGKELLAPENADASVIKTVRERIQNDRVI
LLCTHCTEWKVKTKVKRVPDQPECPECGSTRIASLNPWADEVVQAVRSQEKDDEQREMTE
RAFRAASLVQSHGKQAVIAMAARGVGPHNAAQIINKLREDEAEFYRDILSKEREYARTQA
FWD
NT seq 2892 nt   +upstreamnt  +downstreamnt
atgacagacggggacgtcgcggcgtttacgcgcctcggatcgacggttcggggggcgctc
tccgaacgcggcttctcgcagccgacggcaccgcagcgattggcgattccgccgctgtcg
gccggcgagaacacgctggtgatcgcacctaccggcagtggcaagaccgagacggcgatg
ttacccgtcttcgatcacctcgtggcaggtgacggtgagccgagcacggcgaggcgatcc
tcgtcggcggaaacctccgacggtggtccgccggagggcttcggtgcgctctacatcacc
ccactgcgggcgctcaaccgagacatgcgcgagcgcctcgagtggtggggcgactacctc
gacctcgaggtcgacgttcgccacggcgacacgacccagtatcagcgggggaagcaggcg
gagaacccgccggacgtgctggtcacgacgcccgagaccgtgcaagcgatgctcaccggg
aagcggttgcgggaggcgctcgaggacgtctctcacgtcgtgatcgacgaagtgcacgaa
ctcgcggcgtccaagcgaggcgcgcagttggcgatcggcctcgagcgactccgggacctc
gccggcccgttccagcggatcgggctctcggcgaccgtcggcgatccgggggaggtcggc
cagttcctcaccggcggccgcccctgcgagattcgcgagatcgacgtcggaagcaacgtc
gacgtgacggtccgcgagcccgcggtgaccgaggaggacgaacggctggccggcgaactc
atgaccgaggccgacacggccagccacgtccggctgattcgggacctggtcgagaaacac
gagtcgacgctcattttcgtcaatacgcggcagacagcagaggcgctcggctcgcgattc
aaggaactcgacctgccgatcggggtccaccacggctcgctctcgaaggaggcccgaatc
gacgtcgaggaccgattcaaggccggcgggatcgacgggctactgtgtacgtcctcgatg
gagctcggaatcgatgtgggacaggtcgaccacgtgatccagtacaagagtccccgacag
gtcacccgactcctccagcggatcggtcgcgcgggccaccgacaggacgaagtctcgagc
gggacgatcgtcacgacgcggcccgacgacacgttcgaggcgctttcgatcgcccgccgg
gcccgcgacggcgaggtcgagccagcggcgatccacgagggcagtctggacgtggtcgcg
aatcagctcccggcgatcgtccagagccgtggagatacgtacgtcgacgaggccgtcgag
acggtcacgcgggcgtacccgttccggaccgtccccgaagcgaccgtccgcgagattatc
tccgaactgcatcggaatcggatcctctggttcgacgaggccgaagaccgcatcgagact
actggcggcacctggcagtacgtctacgccaatctctcgatgatcccggacgaggagacc
tacgaggtccacgatatcgcctcggggggccagatcgggaccctggacgagcgattcgtc
gtcaacttcgcccagcccggcgaggtgttcatccagcgcggcgagatgtggcggatcgcc
gaaatcgacgacgaagaggctcgagtcaaggtcagcccgatcgaggaccccgcgggcgag
gtcccgtcgtggatcggccaggagatccccgtccccgccgcggtcgccggcgaggtcggc
gaaattcgggccgtcgcggagccccaactggaggccggtgccgacgccgccgcggtcggc
cgcgaactcgcgggccgctatccgtccgacgagtacaccctgaccgaggcctgcacccaa
ctcgagcaacagatcgatgccgacgcgccgatgccgacggccgaccggctcgtcctcgag
cgacagggacgaacgatcgtgctcaacgcgcccttcggccacacggcgaacgagacgctc
ggtcggatcctctccgcactgctcggtcagcgtgcggggtcgtctgtcggcctcgagacc
gatccctaccggatcgaactcgaggtgcccaactcgatcgcgacgagcgacgtgctcgcg
gtgctcgaggagaccgatcccgaccacgtcgaggcgatcgtcgaactcgggctcaagcgc
tcggacgcgctggcctttcgactcgcgcaagtgtcggcgaagttcggcgcgctcaagcgc
tggcagaatcggggatcaggccgtatctcgaacgaccgattgctggcggcgctcgaggac
acgccgatgtacgaggaagcgattcgggaggtgttccacgaggatctggacgtcgagcgc
gcgagttcggtgctcgcgggaatccagtcgggcgacctcgagttggtgactcaccgcggt
cggacgccgatcggattgggcggtcgctcgtcgggcggcaaggagctgctcgcgcccgaa
aacgccgacgcgagcgtcatcaagacggtcagggagcggattcagaacgaccgggtcatt
ctgctgtgtacccactgcacggagtggaaggtgaagacgaaagtcaagcgagtacccgac
cagcccgagtgccccgagtgcgggtcgacgcggatcgcctccctgaacccgtgggccgac
gaggtcgtgcaggcggtccggtctcaggagaaagacgacgagcaacgggagatgaccgaa
cgcgccttccgggccgcgagcctcgtccagagccacggcaaacaggccgtcatcgcgatg
gccgcccgcggcgtcggtccgcacaacgccgcccagattatcaacaaactccgcgaggac
gaagccgaattctatcgggatatcctctcgaaggagcgcgaatacgcgcggacgcaggcg
ttctgggactaa

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