Natrinema zhouii: HYG81_24395
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Entry
HYG81_24395 CDS
T08017
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
nay
Natrinema zhouii
Brite
KEGG Orthology (KO) [BR:
nay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nay03400
]
HYG81_24395
Enzymes [BR:
nay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYG81_24395
DNA repair and recombination proteins [BR:
nay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HYG81_24395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
UvrD_C
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
UHQ98907
LinkDB
All DBs
Position
unnamed3:complement(124662..128153)
Genome browser
AA seq
1163 aa
AA seq
DB search
MVSDDPIRLQNAQREIRDAYFDHDLGLYTLNCVPGAGKSEVTDHISAEDVLRRYVNGDPT
PEQRVAVISFNRSEAENIVTEICDRLREIVEHNLVPAASKVSDAELEYLIQRVRRAPFVG
TIDSILRDVLSEIAPDVGFEEMPVVGNTARQKHLHAACYRAVQEDSDLAQRLERLEDAYP
AAEYDDDVSEMLETAVTYSRDRRISTEEFRASLEQTFNNVYAEGRPESFDDVFAAINRCI
GADVDESAYDDIDDGERDTVCDADSGLHDDWSDRIDDFCVVLEEYQQTYRQTIRDRGVVS
HTDVAYLVDAYFDDRLDDVNDAHCTRIRQRYQTRIQSLIIDEAQDVSSIQHAALSHLVTP
RTRVFGAGDLLQSVYLWRHAEPSLFEMATVNGEYLGIDWDVHEHRTAKTTYRCVPDIASA
INEISEAALTDPARGDLGELDVRYPGLEANRDSTDESSVHIAAFDPVASDPDSYTWVKPV
EGRGEATTLAALLSKGLADETFTDDDGTPLGITVLFRWSSKMDAYKEAFDEEGLSVRNAS
EDLFECDVVNTVLDVCEWLVAPADPDRTRDLVTESNLGLESLESDFATHRWDTGAVLDDC
GLSDVHQRVLSGLADLCERRDTFLSCPAGTYVEDVIETLALRADPHGCFDVDPAQRVANL
DALVETLKGWEVDEHFTPRELTELIEPFRENTYLGPNQPSTAETSPDVEFRTIHDTKGDQ
DDVVVVANPGFGLWKHGPQAQRFITQGNTAGLAPPTNTDIPSDIALPPFANGLYDPEDTR
DRDVGLRWATGHWCDDVTKSADSTSLVGPDRLKWVAANERAEAWRLLYVALTRAQDHLVV
PLPRSLFGESRPRDRWLDTIRDGLNFTGDETKTYTLDPDADSNDGSFDVGVNDVTLRATW
TTTSTFHGDDVAVNPPRRAELDPWVPRFIKPSTMYPLTDDPDGQALNHLLGNALHTETND
VPYHVPLQFDRLGPNNVGTCLHEVLTTLVERDVSEETLHSLGDGVRNVFDDVVDDHAPQI
DDNERDGLFTFFREEVLDDFLASDLWNRIQRAEQVTVEKPIDGLVTIDDIEIEIHGTSDF
VVTLPSGERHVADLKITLTDQTPETRRRYELQVTAYSYLFEQQDSSHHPVNRTVETFGVE
QDTVESSWPSEIVERRLAALVRQ
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtgacgatccgatccgcctccagaacgcacagcgagaaattcgggatgcgtac
ttcgaccacgatttgggattgtatactctcaactgtgtcccaggtgccgggaagtccgaa
gtcaccgaccacatctccgcagaggacgttctccgccggtacgttaatggggacccgaca
cccgagcagcgagtcgcagtcatctcattcaaccgtagcgaggcggagaatatcgtcacg
gaaatctgtgaccggctgcgagaaatcgtcgaacacaatctcgtccccgccgcaagcaag
gtctcagatgccgagcttgaatatctgatccaacgggtcagacgagcacctttcgtcggt
actatcgacagtatccttcgggacgtgctgagtgagatcgcacccgacgtcggcttcgag
gagatgccagtggtcggaaacacggctcgacagaaacatctgcatgctgcctgttaccgg
gcagttcaggaggattcagacttggcgcagcgactagagcggctggaagacgcgtatccc
gctgccgagtacgatgacgacgtgagcgagatgcttgagaccgccgtcacctacagccgg
gatcggcgtatctctacggaggaattccgtgccagtctcgaacagaccttcaataacgta
tacgcggagggtcgcccggaatcgttcgacgacgtcttcgctgcgatcaatcgctgtatc
ggggcagacgttgacgagagcgcctacgacgacatcgatgatggcgaacgagacacggtc
tgtgacgcagattcgggacttcacgacgactggagtgaccgtatcgacgatttctgcgta
gtgctcgaagagtaccaacaaacgtatcggcagaccatccgcgaccgcggcgtcgtgtca
cacacggatgtcgcgtacctcgtggacgcgtacttcgacgaccgacttgacgacgtcaat
gacgcacactgtacacgaatcagacaacggtaccagacacgtatccagagtctgatcatc
gacgaggcccaagacgtgtcgtcgatacagcacgctgcactctctcatctcgtcactcct
cgtacgcgggtgttcggagccggtgacctgcttcagagcgtctacctgtggcgacacgcc
gagccgtcactcttcgagatggcgacggtcaacggggagtacctcgggattgactgggac
gtccacgaacaccggaccgcgaagacgacgtaccggtgtgtccccgacatcgccagtgcg
atcaacgaaatctctgaggcagctctcactgatccagcacgcggggacctcggagagttg
gacgtccgataccctggtctcgaagctaatcgggattcgaccgacgagtcgagtgtccac
atcgcagccttcgatccggtagcttcagaccccgattcgtacacctgggtcaaacctgtt
gaaggtcgtggggaagcaacgacactagcggcgctgctctcgaagggactcgcggacgag
acgttcaccgatgacgacggaactcctctcgggattacggtcctgttcagatggtcctcg
aagatggacgcgtacaaagaggcgttcgatgaggaggggctcagcgttcggaacgcgagt
gaagacctcttcgagtgcgacgtcgtgaatacggttctcgacgtctgtgagtggctggtc
gcgcctgctgacccggatcgaacccgcgacctcgtcaccgaatcgaacctcggtctcgaa
tcactcgaaagcgacttcgcaacccatcgttgggacaccggcgcggttctcgacgactgc
ggtctctcggatgtccaccagcgcgtgctcagtggcctcgccgatctctgcgaacggcgc
gataccttcctctcctgtcccgctggaacgtacgttgaggacgtcatcgagacgctcgcc
cttcgagcagatccacacgggtgtttcgacgtcgatcctgcacaacgagtcgccaatctc
gatgcactcgtcgagaccctgaaaggatgggaagtagatgagcacttcactccgcgcgaa
ctcaccgagctgatcgaaccgtttcgagagaacacgtacttggggccgaaccagccgagc
acggccgaaacgagtcccgatgtcgaattccgcacgatacacgacaccaagggcgatcaa
gacgatgtcgtcgttgttgcgaatcctgggttcggtctctggaagcacggaccgcaggcc
caacggttcatcactcaagggaacactgccggactcgcccctccgacgaacaccgacatc
ccctcagacattgcgctcccaccgttcgccaacgggctctacgatcccgaggacacgcgg
gaccgcgatgtcggactgcggtgggccacgggccactggtgcgacgacgtcactaagtct
gcggactcgacgtcactcgtcggtcccgaccgcctcaaatgggttgcagcgaatgaacga
gccgaagcgtggcgacttctgtacgtcgcactcacgcgtgcgcaagatcacctcgtcgtt
ccacttccacggtcgctgttcggtgaatcccgaccccgtgaccggtggctcgacacgata
cgggatggcctcaacttcaccggcgacgagaccaagacgtacaccctcgacccagatgct
gattcgaacgacggatcgttcgacgttggcgtcaacgacgtcacacttcgcgcgacgtgg
acaaccacgtctacgttccacggcgacgacgtcgccgtcaatccaccgcgtcgcgccgaa
ctcgacccgtgggtgccccggtttatcaaaccgagcacgatgtatccgctcacggacgat
cccgacggacaggcactcaatcacctcctcggaaacgcactacacacagagaccaacgac
gttccgtaccacgtccccctccagttcgaccggctgggtccaaacaatgtcggtacctgc
ctacacgaggttctgaccacactcgtcgaacgcgatgtatccgaagagacactccattcg
ctaggggacggagttcgcaacgtgtttgacgacgtcgtggacgaccacgctccgcaaatc
gacgacaacgaacgcgacggcctgtttaccttcttccgagaggaggtactggacgacttc
ctcgcgtccgacttgtggaatcggattcaacgggccgaacaggttaccgttgagaagccc
atcgatggtctcgtcactattgacgacatcgagatcgagatacacgggacgagcgatttc
gtcgtcacattgccctccggcgaacggcacgtggccgacctgaaaatcacgctgacggat
caaacgccggagacgcgacgtcggtacgaactccaagtgactgcctactcgtacctcttc
gagcagcaggatagttcgcaccatcctgtgaatcggacagtagagaccttcggagtcgag
caggacacagtcgagtcgtcatggccgtcagaaatcgtcgaacggagactcgcggcttta
gtccgacagtag
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